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The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
作者:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
收藏  |  浏览/下载：237/0  |  提交时间：2020/03/24
rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
浏览  |  Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：381/64  |  提交时间：2019/07/29
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：271/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
浏览  |  Adobe PDF(1636Kb)  |  收藏  |  浏览/下载：251/53  |  提交时间：2019/07/29
Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics 期刊论文
NEW PHYTOLOGIST, 2017, 卷号: 214, 期号: 3, 页码: 1355-1367
作者:  Zhang, Shu-Dong;  Jin, Jian-Jun;  Chen, Si-Yun;  Chase, Mark W.;  Soltis, Douglas E.;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1116Kb)  |  收藏  |  浏览/下载：444/106  |  提交时间：2017/07/10
Diversification  Phylogenomics  Plastome  Rapid Radiation  Rosaceae  Systematic Error  
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 3, 页码: 219-227
作者:  Zhang, Ting;  Zeng, Chun-Xia;  Yang, Jun-Bo;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1664Kb)  |  收藏  |  浏览/下载：321/121  |  提交时间：2017/01/05
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Nuclear Ribosomal Dna  Universal Primer Pairs  
Complete Plastid Genome Sequencing of Four Tilia Species (Malvaceae): A Comparative Analysis and Phylogenetic Implications 期刊论文
PLOS ONE, 2015, 卷号: 10, 期号: 11
作者:  Cai, Jie;  Ma, Peng-Fei;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1913Kb)  |  收藏  |  浏览/下载：205/56  |  提交时间：2016/05/04
Genome and Comparative Transcriptomics of African Wild Rice Oryza longistaminata Provide Insights into Molecular Mechanism of Rhizomatousness and Self-Incompatibility 期刊论文
MOLECULAR PLANT, 2015, 卷号: 8, 期号: 11, 页码: 1683-1686
作者:  Zhang,Yesheng;  Zhang,Shilai;  Liu,Hui;  Fu,Binying;  Li,Lijuan;  Xie,Min;  Song,Yue;  Li,Xin;  Cai,Jing;  Wan,Wenting;  Kui,Ling;  Huang,Hui;  Lyu,Jun;  Dong,Yang;  Wang,Wensheng;  Huang,Liyu;  Zhang,Jing;  Yang,Qinzhong;  Shan,Qinli;  Li,Qiong;  Huang,Wangqi;  Tao,Dayun;  Wang,Muhua;  Chen,Mingsheng;  Yu,Yeisoo;  Wing,Rod A.;  Wang,Wen;  Hu,Fengyi
浏览  |  Adobe PDF(523Kb)  |  收藏  |  浏览/下载：270/107  |  提交时间：2016/01/19
Rapid diversification of five Oryza AA genomes associated with rice adaptation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 卷号: 111, 期号: 46, 页码: E4954-E4962
作者:  Zhang, Qun-Jie;  Zhu, Ting;  Xia, En-Hua;  Shi, Chao;  Liu, Yun-Long;  Zhang, Yun;  Liu, Yuan;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Zhang, Li-Ping;  Huang, Hui;  Jiao, Jun-Ying;  Xu, Ping-Zhen;  Yao, Qiu-Yang;  Zeng, Fan-Chun;  Yang, Li-Li;  Gao, Ju;  Tao, Da-Yun;  Wang, Yue-Ju;  Bennetzen, Jeffrey L.;  Gao, Li-Zhi;  Bennetzen,JL (reprint author),Univ Georgia,Dept Genet,Athens,GA 30602 USA.;  maize@uga.edu;  lgao@mail.kib.ac.cn
浏览  |  Adobe PDF(1635Kb)  |  收藏  |  浏览/下载：464/86  |  提交时间：2015/01/20
Comparative Genomics  Full-genome Sequencing  Genomic Variation  Positive Selection  Oryza  
Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2014, 卷号: 14, 期号: 5, 页码: 1024-1031
作者:  Yang, Jun-Bo;  Li, De-Zhu;  Li, Hong-Tao;  Li, DZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Peoples R China.;  dzl@mail.kib.ac.cn;  lihongtao@mail.kib.ac.cn
Adobe PDF(182Kb)  |  收藏  |  浏览/下载：631/276  |  提交时间：2014/10/11
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Novel Universal Primer Pairs  Phylogenomics  Species Identification