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Biogeographic patterns and environmental drivers of species richness in the globally distributed Millettioid/Phaseoloid clade (Fabaceae, subfamily Papilionoideae) 期刊论文
FRONTIERS IN ECOLOGY AND EVOLUTION, 2023, 卷号: 11, 页码: 1231553
Authors:  Oyebanji,Oyetola O.;  Onditi,Kenneth O.;  Azevedo,Josue A. R.;  Rahaingoson,Fabien R.;  Nneji,Lotanna M.;  Adeleye,Matthew. A.;  Stull,Gregory W.;  Zhang,Rong;  Yi,Ting-Shuang
View  |  Adobe PDF(5673Kb)  |  Favorite  |  View/Download：27/10  |  Submit date：2024/07/10
geographic gradient  legumes  species richness  biogeography  diversity  environmental factors  LATITUDINAL DIVERSITY GRADIENT  BIODIVERSITY  EVOLUTION  LEGUMES  CLASSIFICATION  SPECIATION  PHYLOGENY  NITROGEN  ECOLOGY  RATES  
Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
Authors:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
View  |  Adobe PDF(12821Kb)  |  Favorite  |  View/Download：48/15  |  Submit date：2024/05/09
annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Phylogeny and Biogeography of Morus (Moraceae) 期刊论文
AGRONOMY-BASEL, 2023, 卷号: 13, 期号: 8, 页码: 2021
Authors:  Yang,Chen-Xuan;  Liu,Shui-Yin;  Zerega,Nyree J. C.;  Stull,Gregory W.;  Gardner,Elliot M.;  Tian,Qin;  Gu,Wei;  Lu,Qing;  Folk,Ryan A.;  Kates,Heather R.;  Guralnick,Robert P.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Wang,Yue-Hua;  Yi,Ting-Shuang
View  |  Adobe PDF(3318Kb)  |  Favorite  |  View/Download：63/21  |  Submit date：2024/05/09
ancestral area reconstruction  biogeography  dispersal  divergence times  Morus  phylogeny  MULBERRY  EASTERN  EVOLUTION  GENOME  TIME  ASIA  TOOL  
Honoring a legend: Celebrating the life and legacy of Professor Heng Li 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 3, 页码: 239-240
Authors:  Guo,Hui-Jun;  Huang,Jin-Ling;  Ji,Yun-Heng;  Li,Rong;  Long,Chun-Lin;  Yang,Qin-Er;  Yang,Yong-Ping;  Yi,Ting-Shuang
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A Dated Phylogeny of the Pantropical Genus Dalbergia L.f. (Leguminosae: Papilionoideae) and Its Implications for Historical Biogeography 期刊论文
AGRONOMY-BASEL, 2022, 卷号: 12, 期号: 7, 页码: 1612
Authors:  Rahaingoson, Fabien Robert;  Oyebanji, Oyetola;  Stull, Gregory W.;  Zhang, Rong;  Yi, Ting-Shuang
View  |  Adobe PDF(3659Kb)  |  Favorite  |  View/Download：70/13  |  Submit date：2024/04/30
Dalbergia  Early Miocene  ITS  long-distance dispersal  matK  monophyletic  rbcL  MOLECULAR PHYLOGENY  TROPICAL FLORAS  DISPERSAL  EVOLUTION  FABACEAE  MADAGASCAR  NUCLEAR  ORIGIN  DIVERSIFICATION  VICARIANCE  
Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae 期刊论文
ANNALS OF BOTANY, 2022
Authors:  Zhao, Lei;  Yang, Ying-Ying;  Qu, Xiao-Jian;  Ma, Hong;  Hu, Yi;  Li, Hong-Tao;  Yi, Ting-Shuang;  Li, De-Zhu
View  |  Adobe PDF(1678Kb)  |  Favorite  |  View/Download：77/13  |  Submit date：2024/04/30
Araceae  diversification  phylogenomics  WGDs  adaptation  TRAIT-DEPENDENT SPECIATION  GENE DUPLICATION  ANGIOSPERM DIVERSIFICATION  PHYLOGENOMIC ANALYSES  NUCLEAR GENES  POLYPLOIDY  EVOLUTIONARY  FAMILY  RATES  TOOL  
Genome Skimming Contributes to Clarifying Species Limits in Paris Section Axiparis (Melanthiaceae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 832034
Authors:  Ji, Yunheng;  Yang, Jin;  Landis, Jacob B.;  Wang, Shuying;  Jin, Lei;  Xie, Pingxuan;  Liu, Haiyang;  Yang, Jun-Bo;  Yi, Ting-Shuang
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Name and scale matter: Clarifying the geography of Tibetan Plateau and adjacent mountain regions 期刊论文
GLOBAL AND PLANETARY CHANGE, 2022, 卷号: 215, 页码: 103893
Authors:  Liu, Jie;  Milne, Richard I.;  Zhu, Guang-Fu;  Spicer, Robert A.;  Wambulwa, Moses C.;  Wu, Zeng-Yuan;  Boufford, David E.;  Luo, Ya-Huang;  Provan, Jim;  Yi, Ting-Shuang;  Cai, Jie;  Wang, Hong;  Gao, Lian-Ming;  Li, De-Zhu
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Does IR-loss promote plastome structural variation and sequence evolution? 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 888049
Authors:  Wang, Zi-Xun;  Wang, Ding-Jie;  Yi, Ting-Shuang
View  |  Adobe PDF(2423Kb)  |  Favorite  |  View/Download：19/6  |  Submit date：2024/08/21
plastid genome evolution  structural variation  inverted repeat region loss  substitution rate  comparative genomics  CHLOROPLAST GENOME SEQUENCE  INVERTED REPEAT  NUCLEOTIDE SUBSTITUTION  PHYLOGENETIC ANALYSIS  MOLECULAR EVOLUTION  NONCODING RNAS  RATES  REARRANGEMENTS  ORGANIZATION  CUPRESSOPHYTES  
Phylogenomics and the flowering plant tree of life 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022
Authors:  Guo, Cen;  Luo, Yang;  Gao, Lian-Ming;  Yi, Ting-Shuang;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu
View  |  Adobe PDF(1181Kb)  |  Favorite  |  View/Download：135/15  |  Submit date：2024/08/21
angiosperms  hybridization  incomplete lineage sorting  orthology inference  phylogenetic conflicts  reduced representation sequencing  whole-genome sequencing  whole-genome duplication  SYSTEMATIC-ERRORS  RNA-SEQ  SEQUENCE CAPTURE  SEED PLANTS  DATA SETS  GENOME  EVOLUTION  RADSEQ  TOOL  CLASSIFICATION