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Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020, 卷号: 69, 期号: 4, 页码: 613-622
Authors:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
Favorite  |  View/Download:17/0  |  Submit date:2020/08/17
Leguminosae  maximum likelihood  phylogenetic conflict  plastome  recalcitrant relationships  stochasticity  systematic error  
Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales 期刊论文
SCIENTIFIC REPORTS, 2020, 卷号: 10, 期号: 1, 页码: 6
Authors:  Jin, Dong-Min;  Jin, Jian-Jun;  Yi, Ting-Shuang
Favorite  |  View/Download:31/0  |  Submit date:2020/08/17
New Insights Into the Plastome Evolution of the Millettioid/Phaseoloid Clade (Papilionoideae, Leguminosae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 11, 页码: 13
Authors:  Oyebanji, Oyetola;  Zhang, Rong;  Chen, Si-Yun;  Yi, Ting-Shuang
Favorite  |  View/Download:7/0  |  Submit date:2020/05/27
evolutionary relationships  inversion  IR expansion  contraction  Leguminosae  Plastome  the Millettioid  Phaseoloid clade  
Born migrators: Historical biogeography of the cosmopolitan family Cannabaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 13
Authors:  Jin, Jian-Jun;  Yang, Mei-Qing;  Fritsch, Peter W.;  van Velzen, Robin;  Li, De-Zhu;  Yi, Ting-Shuang
View  |  Adobe PDF(484Kb)  |  Favorite  |  View/Download:39/10  |  Submit date:2020/03/18
ancestral geographical range analysis  Cannabaceae  dispersal  molecular dating  Northern Hemisphere  phylogeny  
Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1, 页码: 14
Authors:  Ji, Yunheng;  Yang, Lifang;  Chase, Mark W.;  Liu, Changkun;  Yang, Zhenyan;  Yang, Jin;  Yang, Jun-Bo;  Yi, Ting-Shuang
View  |  Adobe PDF(3013Kb)  |  Favorite  |  View/Download:27/2  |  Submit date:2020/03/18
Plastid phylogenomics  Biogeography  Radiative diversification  Cytonuclear discordance  Large genome size  Parideae  Paris  Melanthiaceae  Trilliaceae  
Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
Authors:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
View  |  Adobe PDF(1214Kb)  |  Favorite  |  View/Download:20/5  |  Submit date:2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae) 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2019, 页码: 13
Authors:  Ji, Yunheng;  Liu, Changkun;  Yang, Zhenyan;  Yang, Lifang;  He, Zhengshan;  Wang, Hengchang;  Yang, Junbo;  Yi, Tingshuang
View  |  Adobe PDF(836Kb)  |  Favorite  |  View/Download:126/31  |  Submit date:2019/09/10
next-generation DNA barcodes  Panax  plastome  ribosomal DNA  species discrimination  standard DNA barcodes  
The plastid genome of Pentadiplandra brazzeana Baillon (Pentadiplandraceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 4002-4003
Authors:  Zheng, Xu;  Yi, Ting-Shuang
View  |  Adobe PDF(782Kb)  |  Favorite  |  View/Download:14/2  |  Submit date:2020/03/26
Pentadiplandra brazzeana  Pentadiplandraceae  Brassicales  plastome  phylogenomics  brazzein  
The complete plastome of Ctenolophon englerianus Mildbr. (Ctenolophonaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 3379-3380
Authors:  Wang, Zi-Xun;  Jin, Dong-Min;  Wang, Guo-Dong;  Yi, Ting-Shuang
View  |  Adobe PDF(863Kb)  |  Favorite  |  View/Download:84/2  |  Submit date:2019/12/20
Ctenolophon englerianus  Ctenolophonaceae  plastome  phylogenomics  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
Authors:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
View  |  Adobe PDF(1302Kb)  |  Favorite  |  View/Download:40/10  |  Submit date:2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms