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Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
Authors:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
View  |  Adobe PDF(854Kb)  |  Favorite  |  View/Download:6/3  |  Submit date:2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
Authors:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
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annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Phylogeny and Biogeography of Morus (Moraceae) 期刊论文
AGRONOMY-BASEL, 2023, 卷号: 13, 期号: 8, 页码: 2021
Authors:  Yang,Chen-Xuan;  Liu,Shui-Yin;  Zerega,Nyree J. C.;  Stull,Gregory W.;  Gardner,Elliot M.;  Tian,Qin;  Gu,Wei;  Lu,Qing;  Folk,Ryan A.;  Kates,Heather R.;  Guralnick,Robert P.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Wang,Yue-Hua;  Yi,Ting-Shuang
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ancestral area reconstruction  biogeography  dispersal  divergence times  Morus  phylogeny  MULBERRY  EASTERN  EVOLUTION  GENOME  TIME  ASIA  TOOL  
First macrofossil record of Icacinaceae in East Asia (early Oligocene, Wenshan Basin) and its ecological implications 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 2, 页码: 445-455
Authors:  Del Rio,Cedric;  Huang,Jian;  Stull,Gregory W.;  Allemand,Remi;  Zhou,Zhe-Kun;  Su,Tao
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China  endocarps  Icacinaceae Iodes  Oligocene  paleoclimate  NORTH-AMERICA  SOUTHWEST CHINA  FOSSIL RECORD  EOCENE  FRUITS  MIOCENE  PALEOCENE  WOOD  PALEOGEOGRAPHY  HEMISPHERE  
A Dated Phylogeny of the Pantropical Genus Dalbergia L.f. (Leguminosae: Papilionoideae) and Its Implications for Historical Biogeography 期刊论文
AGRONOMY-BASEL, 2022, 卷号: 12, 期号: 7, 页码: 1612
Authors:  Rahaingoson, Fabien Robert;  Oyebanji, Oyetola;  Stull, Gregory W.;  Zhang, Rong;  Yi, Ting-Shuang
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Dalbergia  Early Miocene  ITS  long-distance dispersal  matK  monophyletic  rbcL  MOLECULAR PHYLOGENY  TROPICAL FLORAS  DISPERSAL  EVOLUTION  FABACEAE  MADAGASCAR  NUCLEAR  ORIGIN  DIVERSIFICATION  VICARIANCE  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
Authors:  Gregory W. Stull
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Phylogenomic conflict coincides with rapid morphological innovation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 卷号: 118, 期号: 19, 页码: e2023058118
Authors:  Parins-Fukuchi,Caroline;  Stull,Gregory W.;  Smith,Stephen A.
Favorite  |  View/Download:52/0  |  Submit date:2022/04/02
phylogenomics  morphological evolution  gene-tree discordance  tempo and mode  molecular evolution  GENE TREE DISCORDANCE  FOSSIL FLOWERS  SEED PLANTS  CARYOPHYLLALES  EVOLUTION  ORIGIN  ANCIENT  ROOT  LIFE  DIVERSIFICATION  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
Authors:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
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SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Fossil fruits of Firmiana and Tilia from the middle Miocene of South Korea and the efficacy of the Bering land bridge for the migration of mesothermal plants 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 6, 页码: 480-491
Authors:  Jia,Lin-Bo;  Nam,Gi-Soo;  Su,Tao;  Stull,Gregory W.;  Li,Shu-Feng;  Huang,Yong-Jiang;  Zhou,Zhe-Kun
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8 December 2020  Asia  Bering land bridge  Biogeography  Middle Miocene  Malvaceae  NORTH-AMERICA  EASTERN ASIA  CLIMATE  PATTERNS  GRADIENTS  EVOLUTION  MALVACEAE  EURASIA  BRACTS  EUROPE  
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 163, 页码: 107232
Authors:  Yang,Ying-Ying;  Qu,Xiao-Jian;  Zhang,Rong;  Stull,Gregory W.;  Yi,Ting-Shuang
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Betulaceae  Juglandaceae  Myricaceae  Quercus  Phylogenetics  Chloroplast capture  RESTRICTION SITE VARIATION  INTERSPECIFIC GENE FLOW  DNA-SEQUENCES  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  CLADISTIC-ANALYSIS  SEED PLANTS  NUCLEAR  BETULACEAE  DIVERSIFICATION