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Marsdenia tenacissima genome reveals calcium adaptation and tenacissoside biosynthesis 期刊论文
PLANT JOURNAL, 2023, 卷号: 113, 期号: 6, 页码: 1146-1159
Authors:  Zhou,Yanli;  Fan,Wei;  Zhang,Haoyue;  Zhang,Jingling;  Zhang,Guanghui;  Wang,Ding;  Xiang,Guisheng;  Zhao,Changhong;  Li,Lianhua;  He,Simei;  Lu,Yingchun;  Zhao,Jiuxia;  Meng,Zhengui;  Zhang,Xianmin;  Meng,Hengling;  Yin,Xinhua;  Yang,Shengchao;  Long,Guangqiang
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genome assembly  Hi-C  Apocynaceae  Ca2+ adaptation  cell-wall remodeling  Marsdenia tenacissima  CELL  GENES  TRANSCRIPTOME  MECHANISMS  ALIGNMENT  SOIL  
Multi-omics analysis reveals the evolutionary origin of diterpenoid alkaloid biosynthesis pathways in Aconitum 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023, 卷号: 65, 期号: 10, 页码: 2320-2335
Authors:  Zhao,Dake;  Zhang,Ya;  Ren,Huanxing;  Shi,Yana;  Dong,Ding;  Li,Zonghang;  Cui,Guanghong;  Shen,Yong;  Mou,Zongmin;  Kennelly,Edward J.;  Huang,Luqi;  Ruan,Jue;  Chen,Suiyun;  Yu,Diqiu;  Cun,Yupeng
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Aconitum vilmorinianum  acute toxicity  biosynthetic pathway  diterpenoid alkaloid  evolutionary origin  genome assembly  PHYLOGENETIC ANALYSIS  SUPPLEMENT TREMBL  CANDIDATE GENES  R PACKAGE  TOOL  TRANSCRIPTOME  IDENTIFICATION  RANUNCULACEAE  PREDICTION  DIVERSITY  
Chromosome-scale genome assembly of sweet tea (Lithocarpus polystachyus Rehder) 期刊论文
SCIENTIFIC DATA, 2023, 卷号: 10, 期号: 1, 页码: 873
Authors:  Liu,Hui;  Zhang,Rengang;  Zhou,Biao-Feng;  Shen,Zhao;  Chen,Xue-Yan;  Gao,Jie;  Wang,Baosheng
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DIHYDROCHALCONES  FAGACEAE  IDENTIFICATION  BIOACTIVITIES  TRANSCRIPTOME  CHALCONES  PROVIDES  SYSTEM  
Chromosome-level genome assembly of Murraya paniculata sheds light on biosynthesis of floral volatiles 期刊论文
BMC BIOLOGY, 2023, 卷号: 21, 期号: 1, 页码: 142
Authors:  Yang,Tianyu;  Yin,Xin;  Kang,Haotong;  Yang,Danni;  Yang,Xingyu;  Yang,Yunqiang;  Yang,Yongping
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Murraya paniculata  Citrus species  Comparative genomics  Transposon  Flower volatiles  Phenylacetaldehyde  CITRUS  SYSTEM  RETROTRANSPOSONS  IDENTIFICATION  EVOLUTION  ALIGNMENT  PROVIDES  
Evolutionary history of two evergreen Rhododendron species as revealed by chromosome-level genome assembly 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1123707
Authors:  Wu,Xiaopei;  Zhang,Lu;  Wang,Xiuyun;  Zhang,Rengang;  Jin,Guihua;  Hu,Yanting;  Yang,Hong;  Wu,Zhenzhen;  Ma,Yongpeng;  Zhang,Chengjun;  Wang,Jihua
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Rhododendron delavayi  Rhododendron irroratum  genome evolution  gene duplication  anthocyanin biosynthesis  NBS-encoding genes  MULTIPLE SEQUENCE ALIGNMENT  RICH REPEAT GENES  PHYLOGENETIC ANALYSIS  ARABIDOPSIS-THALIANA  WHOLE-GENOME  TOOL  PIGMENTATION  DUPLICATION  RESISTANCE  ACCURATE  
Insights into the differentiation and adaptation within Circaeasteraceae from Circaeaster agrestis genome sequencing and resequencing 期刊论文
ISCIENCE, 2023, 卷号: 26, 期号: 3, 页码: 106159
Authors:  Sun,Yanxia;  Zhang,Aidi;  Zhang,Xu;  Landis,Jacob B.;  Zhang,Huajie;  Zhang,Xiujun;  Sun,Hang;  Wang,Hengchang
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DELETERIOUS MUTATIONS  POPULATION-SIZE  EVOLUTION  DIVERSITY  SELECTION  INTERFERENCE  PREDICTION  CONTRIBUTE  LINEAGES  FORMAT  
基于牛角瓜基因组解析其种子纤维发育和镉胁迫响应的机理 学位论文
: 中国科学院大学, 2022
Authors:  杨景雅
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牛角瓜，基因组，比较基因组，纤维发育，镉胁迫，分子机制  Calotropis, Genomics, Comparative genome, Fiber development, Cadmium stress, Molecular mechanism.  
构建多组学数据分析流程用于挖掘黄草乌生物碱合成相关基因 学位论文
: 中国科学院大学, 2022
Authors:  任焕幸
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二萜生物碱  Diterpenoid alkaloids  比较基因组学  Comparative genomics  权重基因共表达网络  Weighted gene co-expression network  最小生成树  Minimum spanning tree  代谢网络  Metabolic network  
Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae 期刊论文
ANNALS OF BOTANY, 2022
Authors:  Zhao, Lei;  Yang, Ying-Ying;  Qu, Xiao-Jian;  Ma, Hong;  Hu, Yi;  Li, Hong-Tao;  Yi, Ting-Shuang;  Li, De-Zhu
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Araceae  diversification  phylogenomics  WGDs  adaptation  TRAIT-DEPENDENT SPECIATION  GENE DUPLICATION  ANGIOSPERM DIVERSIFICATION  PHYLOGENOMIC ANALYSES  NUCLEAR GENES  POLYPLOIDY  EVOLUTIONARY  FAMILY  RATES  TOOL  
Phylotranscriptomics of Theaceae: generic-level relationships, reticulation and whole-genome duplication 期刊论文
ANNALS OF BOTANY, 2022, 卷号: 129, 期号: 4, 页码: 457-471
Authors:  Zhang, Qiong;  Zhao, Lei;  Folk, Ryan A.;  Zhao, Jian-Li;  Zamora, Nelson A.;  Yang, Shi-Xiong;  Soltis, Douglas E.;  Soltis, Pamela S.;  Gao, Lian-Ming;  Peng, Hua;  Yu, Xiang-Qin
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