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Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of plastid genes 期刊论文
BMC Plant Biology, 2020, 卷号: 20, 期号: 1
Authors:  Zhang,Xu;  Sun,Yanxia;  Landis,Jacob B.;  Lv,Zhenyu;  Shen,Jun;  Zhang,Huajie;  Lin,Nan;  Li,Lijuan;  Sun,Jiao;  Deng,Tao;  Sun,Hang;  Wang,Hengchang
Favorite  |  View/Download:11/0  |  Submit date:2020/08/17
Plastome  Phylogenetic discordance  Gentianeae  Coalescence  Gene trees  Nucleotide substitution rates  Gene characteristics  Phylogenetic informativeness  
Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020, 卷号: 69, 期号: 4, 页码: 613-622
Authors:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
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Leguminosae  maximum likelihood  phylogenetic conflict  plastome  recalcitrant relationships  stochasticity  systematic error  
Genomic insights into adaptation to heterogeneous environments for the ancient relictualCircaeaster agrestis(Circaeasteraceae, Ranunculales) 期刊论文
NEW PHYTOLOGIST, 2020, 页码: 17
Authors:  Zhang, Xu;  Sun, Yanxia;  Landis, Jacob B.;  Zhang, Jianwen;  Yang, Linsen;  Lin, Nan;  Zhang, Huajie;  Guo, Rui;  Li, Lijuan;  Zhang, Yonghong;  Deng, Tao;  Sun, Hang;  Wang, Hengchang
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Circaeaster agrestis  conservation  environmental heterogeneity  genetic structure  local adaptation  restriction site-associated DNA sequencing (RAD-seq)  temperature variables  
The Complete Plastomes of Five Hemiparasitic Plants (Osyris wightiana,Pyrularia edulis,Santalum album,Viscum liquidambaricolum, andV. ovalifolium): Comparative and Evolutionary Analyses Within Santalales 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 11
Authors:  Guo, Xiaorong;  Liu, Changkun;  Zhang, Guangfei;  Su, Wenhua;  Landis, Jacob B.;  Zhang, Xu;  Wang, Hengchang;  Ji, Yunheng
Favorite  |  View/Download:4/0  |  Submit date:2020/08/17
parasitism  plastome degradation  gene loss  pseudogenization  Cervantesiaceae  Santalaceae  Viscaceae  
Comparative analysis of complete plastid genome reveals powerful barcode regions for identifying wood of Dalbergia odorifera and D. tonkinensis (Leguminosae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 页码: 12
Authors:  Qin, Ming;  Zhu, Cheng-Jie;  Yang, Jun-Bo;  Vatanparast, Mohammad;  Schley, Rowan;  Lai, Qiang;  Zhang, Dan-Yan;  Tu, Tie-Yao;  Klitgard, Bente B.;  Li, Shi-Jin;  Zhang, Dian-Xiang
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DNA barcoding  Fabaceae  Hongmu  phylogenomics  rosewood  wood identification  
Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales 期刊论文
SCIENTIFIC REPORTS, 2020, 卷号: 10, 期号: 1, 页码: 6
Authors:  Jin, Dong-Min;  Jin, Jian-Jun;  Yi, Ting-Shuang
Favorite  |  View/Download:17/0  |  Submit date:2020/08/17
Complete plastomes of 17 species of maples (Sapindaceae: Acer): comparative analyses and phylogenomic implications 期刊论文
PLANT SYSTEMATICS AND EVOLUTION, 2020, 卷号: 306, 期号: 3, 页码: 15
Authors:  Wang, Wencai;  Chen, Siyun;  Zhang, Xianzhi
Favorite  |  View/Download:8/0  |  Submit date:2020/06/23
Acer  Chloroplast genome  Comparative genomics  Divergent IR borders  Mutation hotspots  Phylogenomics  
Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae) 期刊论文
PLOS ONE, 2020, 卷号: 15, 期号: 5, 页码: 25
Authors:  Zhao, Fei;  Li, Bo;  Drew, Bryan T.;  Chen, Ya-Ping;  Wang, Qiang;  Yu, Wen-Bin;  Liu, En-De;  Salmaki, Yasaman;  Peng, Hua;  Xiang, Chun-Lei
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Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages 期刊论文
AMERICAN JOURNAL OF BOTANY, 2020, 卷号: 107, 期号: 5, 页码: 790-805
Authors:  Stull, Gregory W.;  Soltis, Pamela S.;  Soltis, Douglas E.;  Gitzendanner, Matthew A.;  Smith, Stephen A.
Favorite  |  View/Download:15/0  |  Submit date:2020/06/15
Aquifoliales  asterids  cytonuclear discordance  Ericales  incomplete lineage sorting  phylogenomics  whole-genome duplication  
ddRAD analyses reveal a credible phylogenetic relationship of the four main genera of Bambusa-Dendrocalamus-Gigantochloa complex (Poaceae: Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 146, 页码: 12
Authors:  Liu, Jing-Xia;  Zhou, Meng-Yuan;  Yang, Guo-Qian;  Zhang, Yu-Xiao;  Ma, Peng-Fei;  Guo, Cen;  Vorontsova, Maria S.;  Li, De-Zhu
Favorite  |  View/Download:19/0  |  Submit date:2020/05/27
Ancient introgression  BDG complex  Genome-wide SNPs  Morphological evidence  nDNA-plastid DNA associations