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中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
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Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera
期刊论文
SCIENTIA HORTICULTURAE, 2023, 卷号: 313, 页码: 111909
Authors:
Shi,Wenbo
;
Song,Weicai
;
Liu,Jin
;
Shi,Chao
;
Wang,Shuo
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Submit date:2024/07/17
Citrus
Plastid genomics
Genomic structure
Sequence variation
Molecular markers
Phylogeny
Taxonomy
HORT. EX TANAKA
GENETIC DIVERSITY
MOLECULAR PHYLOGENY
SPACER REGION
JEJU ISLAND
SEQUENCE
DNA
ORIGIN
TAXONOMY
AURANTIOIDEAE
An updated classification for the hyper-diverse genus Corydalis (Papaveraceae: Fumarioideae) based on phylogenomic and morphological evidence
期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023
Authors:
Chen,Jun-Tong
;
Liden,Magnus
;
Huang,Xian-Han
;
Zhang,Liang
;
Zhang,Xin-Jian
;
Kuang,Tian-Hui
;
Landis,Jacob B.
;
Wang,Dong
;
Deng,Tao
;
Sun,Hang
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Submit date:2024/07/10
character evolution
Corydalis
genome skimming
Papaveraceae
phylogeny
FUMARIACEAE
EVOLUTIONARY
HIMALAYA
HUBEI
Home at last: Molecular phylogenetic analyses support subsuming Metastachydium within Phlomoides (Lamiaceae)
期刊论文
TAXON, 2023
Authors:
Zhao,Yue
;
Zhao,Fei
;
Salmaki,Yasaman
;
Paton,Alan
;
Cai,Jie
;
Drew,Bryan T.
;
Mahmoudi,Chonour
;
Efimov,Petr
;
Turginov,Orzimat T.
;
Liang,Cun-Zhu
;
Chen,Ya-Ping
;
Xiang,Chun-Lei
Adobe PDF(2112Kb)
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Submit date:2024/07/10
Central Asia
Lamioideae
nrITS
Phlomideae
Phlomis
plastome phylogenomics
COMPLETE CHLOROPLAST GENOME
PLASTID DNA
LEPECHINIA LAMIACEAE
LAMIOIDEAE LAMIACEAE
CHARACTER EVOLUTION
NUCLEAR
CLASSIFICATION
POSITION
ORIGIN
GENERA
East Asian-North American disjunctions and phylogenetic relationships within subtribe Nepetinae (Lamiaceae)
期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 187, 页码: 107873
Authors:
Rose,Jeffrey P.
;
Wiese,Joshua
;
Pauley,Nicole
;
Dirmenci,Tuncay
;
Celep,Ferhat
;
Xiang,Chun-Lei
;
Drew,Bryan T.
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Submit date:2024/07/25
Acrto-Teritary Flora
Disjunction
Lamiaceae
Nepetinae
Vicariance
BERING LAND-BRIDGE
TRIBE MENTHEAE
MOLECULAR PHYLOGENETICS
LEPECHINIA LAMIACEAE
STAMINAL EVOLUTION
NONCODING REGIONS
VASCULAR PLANTS
CLASSIFICATION
GENUS
BIOGEOGRAPHY
Deciphering complex reticulate evolution of Asian Buddleja (Scrophulariaceae): insights into the taxonomy and speciation of polyploid taxa in the Sino-Himalayan region
期刊论文
ANNALS OF BOTANY, 2023
Authors:
Yang,Fengmao
;
Ge,Jia
;
Guo,Yongjie
;
Olmstead,Richard
;
Sun,Weibang
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Submit date:2024/05/09
Buddleja
phylogenomics
reticulate evolution
polyploidy
plastid genome
low-copy nuclear gene
HYBRIDIZATION
ALIGNMENT
DIVERSIFICATION
ALLOPOLYPLOIDY
PHYLOGENETICS
FRAMEWORK
NUCLEAR
ROBUST
FLOW
Characteristics of plastid genomes in the genus Ceratostigma inhabiting arid habitats in China and their phylogenomic implications
期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 303
Authors:
Zhao,Yu-Juan
;
Liu,Jian
;
Yin,Gen-Shen
;
Gong,Xun
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Submit date:2024/05/09
Ceratostigma
Plastid genome
Comparative analysis
Interspecific relationship
Plumbaginaceae
COMPLETE CHLOROPLAST GENOME
MEKONG-SALWEEN DIVIDE
LIMONIUM-SINENSE
INVERTED REPEAT
SEQUENCE
EVOLUTION
DNA
PLUMBAGINACEAE
CONSEQUENCES
DIVERSITY
Habitat-related plastome evolution in the mycoheterotrophic Neottia listeroides complex (Orchidaceae, Neottieae)
期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 282
Authors:
Shao,Bing-Yi
;
Wang,Mo-Zhu
;
Chen,Si-Si
;
Ya,Ji-Dong
;
Jin,Xiao-Hua
Adobe PDF(3432Kb)
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Submit date:2024/05/09
Mycoheterotrophy
Neottia listeroides complex
Chloroplast genomes
Micro-evolution
MULTIPLE SEQUENCE ALIGNMENT
SYMBIOTIC GERMINATION
PHYLOGENETIC ANALYSIS
SPECIES ORCHIDACEAE
EPIDENDROIDEAE
GENOME
GASTRODIEAE
REDUCTION
PLANTS
PHOTOSYNTHESIS
Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia
期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
Authors:
Lv,Shi-Yu
;
Ye,Xia-Ying
;
Li,Zhong-Hu
;
Ma,Peng-Fei
;
Li,De-Zhu
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Submit date:2024/05/09
Fargesia
Genome-skimming
DNA barcoding
Plastome
Ribosomal DNA
WHOLE CHLOROPLAST GENOMES
RNA-SEQ DATA
ARUNDINARIEAE POACEAE
BAMBUSOIDEAE
TEMPERATE
PLATFORM
Distinctive plastome evolution in carnivorous angiosperms
期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 660
Authors:
Fu,Chao-Nan
;
Wicke,Susann
;
Zhu,An-Dan
;
Li,De-Zhu
;
Gao,Lian-Ming
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Submit date:2024/05/09
Carnivory
Plastome
Substitution rates
Prey-derived nutrient utilization
CHLOROPLAST GENOME
PHYLOGENETIC ANALYSIS
DIGESTIVE MUTUALISM
PARASITIC PLANTS
SEQUENCE
GENES
COEVOLUTION
ALIGNMENT
INSIGHTS
ORGANIZATION
Progress, challenge and prospect of plant plastome annotation
期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
Authors:
Qu,Xiao-Jian
;
Zou,Dan
;
Zhang,Rui-Yu
;
Stull,Gregory W.
;
Yi,Ting-Shuang
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Submit date:2024/05/09
annotation standards
chloroplast genome
plastome
protein structure
pseudogenes
RNA-editing genes
MITOCHONDRIAL GENES
RNA
GENOME
SEQUENCE
CHLOROPLASTS
TRANSLATION