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Fungal diversity notes 1818-1918: taxonomic and phylogenetic contributions on genera and species of fungi 期刊论文
FUNGAL DIVERSITY, 2025, 卷号: 130, 期号: 1, 页码: 1-261
Authors:  Manawasinghe, Ishara S.;  Hyde, Kevin D.;  Wanasinghe, Dhanushka N.;  Karunarathna, Samantha C.;  Maharachchikumbura, Sajeewa S. N.;  Samarakoon, Milan C.;  Voglmayr, Hermann;  Pang, Ka-Lai;  Chiang, Michael Wai-Lun;  Jones, E. B. Gareth;  Saxena, Ramesh K.;  Kumar, Arun;  Rajeshkumar, Kunhiraman C.;  Selbmann, Laura;  Coleine, Claudia;  Hu, Yuwei;  Ainsworth, A. Martyn;  Liimatainen, Kare;  Niskanen, Tuula;  Ralaiveloarisoa, Anna;  Arumugam, Elangovan;  Kezo, Kezhocuyi;  Kaliyaperumal, Malarvizhi;  Gunaseelan, Sugantha;  Dissanayake, Asha J.;  Khalid, Abdul Nasir;  Gajanayake, Achala Jeevani;  Flakus, Adam;  Armand, Alireza;  Aptroot, Andre;  Rodrigues, Andre;  Tsurykau, Andrei;  Lopez-Villalba, Angela;  de Farias, Antonio Roberto Gomes;  Sanchez, Antonio;  Goes-Neto, Aristoteles;  Goto, Bruno T.;  de Souza, Carlos A. F.;  Chuaseeharonnachai, Charuwan;  Lin, Chuan-Gen;  Li, Cuijinyi;  Denchev, Cvetomir M.;  Guerra-Mateo, Daniel;  Tennakoon, Danushka S.;  Wei, De-Ping;  Begerow, Dominik;  Alves, Eduardo;  Drechsler-Santos, Elisandro Ricardo;  Sousa, Enayra Silva;  de Medeiros, Erika Valente;  Langer, Ewald;  Zhang, Fa;  de Souza, Francisco A.;  Magurno, Franco;  Barreto, Gabriel G.;  Moreno, Gabriel;  Mane, Gajanan;  Alves-Silva, Genivaldo;  da Silva, Gladstone Alves;  Xia, Guiyang;  Shen, Hong-Wei;  Gui, Heng;  Senanayake, Indunil C.;  Luangsa-ard, Janet Jennifer;  Liu, Jia-Wei;  Liu, Jian-Kui;  Ma, Jian;  Lin, Jie-Ying;  Beserra Jr, Jose Evando Aguiar;  Cano-Lira, Jose F.;  Gene, Josepa;  Harikrishnan, Kuniyil;  Lu, Li;  dos Santos, Lidiane A.;  Xu, Lijian;  Lacerda, Lorena T.;  Gusmao, Luis F. P.;  Caceres, Marcela E. S.;  Camara, Marcos Paz Saraiva;  de Barros-Barreto, Maria B. B.;  Calabon, Mark S.;  Kukwa, Martin;  Kemler, Martin;  de Melo, Maruzanete Pereira;  Ghobad-Nejhad, Masoomeh;  Luo, Mei;  Ding, Mengmeng;  Doilom, Mingkwan;  Phonemany, Monthien;  Usman, Muhammad;  Thongklang, Naritsada;  Boonyuen, Nattawut;  Ashtekar, Nikhil;  Kularathnage, Nuwan D.;  Sruthi, Onden P.;  Kwantong, Papichaya;  Ansil, Parayelil A.;  Kooij, Pepijn W.;  Zhao, Qi;  Alfenas, Rafael Ferreira;  de Oliveira, Rafael J. V.;  Singh, Raghvendra;  da Silva, Rejane Maria Ferreira;  Avchar, Rameshwar;  Morey, Rashmi;  Sharma, Rohit;  Xu, Rong-Ju;  da Silveira, Rosa Mara B.;  Xu, Rui-Fang;  Jayawardena, Ruvishika S.;  Nanu, Salna;  Nuankaew, Salilaporn;  Tibpromma, Saowaluck;  Boonmie, Saranyapath;  Somrithipol, Sayanh;  Varghese, Sherin;  Moreira, Silvino Intra;  Rajwar, Soumyadeep;  He, Shu-Cheng;  Kumar, T. K. Arun;  Denchev, Teodor T.;  Luangharn, Thatsanee;  de Oliveira, Thays Gabrielle Lins;  Du, Tian-Ye;  Wen, Ting-Chi;  Du, Tingting;  Wu, Tong;  Sri-Indrasutdhi, Veera;  Doyle, Vinson P.;  Baulin, Vladimir;  Dong, Wei;  Li, Wen-Li;  Lu, Wen-Hua;  Tian, Wenhui;  dos Vieira, Willie Anderson;  von Brackel, Wolfgang;  Yu, Xian-Dong;  Zhang, Xian;  Liu, Xiang-Fu;  Peng, Xing-Can;  Chen, Yanpeng;  Yang, Yanyan;  Gao, Ying;  Xiong, Yinru;  Shu, Yongxin;  Lu, Yong-Zhong;  Shen, Yuan-Min;  Zhou, Yueyan;  Zhang, Yun Xia;  Zhang, Wei;  Luo, Zong-Long;  Madushani, Manawaduge Ayesha;  Cheewangkoon, Ratchadawan;  Song, Jia Ge;  Xu, Biao
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Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance 期刊论文
NATURE GENETICS, 2024, 卷号: 56, 期号: 4, 页码: -
Authors:  Ma, Peng-Fei;  Liu, Yun-Long;  Guo, Cen;  Jin, Guihua;  Guo, Zhen-Hua;  Mao, Ling;  Yang, Yi-Zhou;  Niu, Liang-Zhong;  Wang, Yu-Jiao;  Clark, Lynn G.;  Kellogg, Elizabeth A.;  Xu, Zu-Chang;  Ye, Xia-Ying;  Liu, Jing-Xia;  Zhou, Meng-Yuan;  Luo, Yan;  Yang, Yang;  Soltis, Douglas E.;  Bennetzen, Jeffrey L.;  Soltis, Pamela S.;  Li, De-Zhu
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Genetic structure of a narrowly distributed species Chimonobambusa tumidissinoda in the Yunnan-Guizhou Plateau, and its implications for conservation 期刊论文
GLOBAL ECOLOGY AND CONSERVATION, 2024, 卷号: 53, 页码: e03028
Authors:  Ye, Xia-Ying;  Wang, Wei-Hua;  Wei, Guo-Rong;  Li, Bing;  Li, Yan;  Ma, Peng-Fei
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Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
Authors:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
View  |  Adobe PDF(2234Kb)  |  Favorite  |  View/Download：384/77  |  Submit date：2024/05/09
Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Inflorescences of Fargesia angustissima TP Yi and Yushania pauciramificans TP Yi (Poaceae, Bambusoideae) shed light on the taxonomy of the Sino-Himalayan alpine bamboos 期刊论文
PHYTOKEYS, 2022, 期号: 215, 页码: 27-36
Authors:  Ye, Xia-Ying;  Xu, Zu-Chang;  Cheng, Yue-Hong;  Wang, Wei-Hua;  Li, De -Zhu
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Borinda  Fargesia  infloresence  reproductive characters  Yushania  REVISION  
Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1183-1197
Authors:  Ye,Xia-Ying;  Ma,Peng-Fei;  Guo,Cen;  Li,De-Zhu
Favorite  |  View/Download：185/0  |  Submit date：2022/04/02
plastome  ddRAD  Fargesia  phylogenetic incongruence  reticulate evolution  Yushania  CONFLICTING GENE TREES  BAMBOOS POACEAE  ARUNDINARIEAE POACEAE  PHYLOGENETIC-RELATIONSHIPS  MORPHOLOGICAL EVOLUTION  BALANCING SELECTION  THAMNOCALAMUS GROUP  ALLIES GRAMINEAE  RADSEQ DATA  GBSSI GENE  
Two new species of Yushania (Poaceae: Bambusoideae) from South China, with a taxonomic revision of related species 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 6, 页码: 492-501
Authors:  Ye,Xia-Ying;  Zhang,Yu-Xiao;  Li,De-Zhu
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Arundinarieae  Yushania  Hunan  New Species  Taxonomy  Yunnan  
Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 756-773
Authors:  Guo,Cen;  Ma,Peng-Fei;  Yang,Guo-Qian;  Ye,Xia-Ying;  Guo,Ying;  Liu,Jing-Xia;  Liu,Yun-Long;  Eaton,Deren A. R.;  Guo,Zhen-Hua;  Li,De-Zhu
Favorite  |  View/Download：317/0  |  Submit date：2022/04/02
Arundinarieae  ddRAD  paleopolyploid  genome skimming  rapid diversification  incongruence  ARUNDINARIEAE POACEAE BAMBUSOIDEAE  SOUTH CHINA SEA  WOODY BAMBOOS  PHYLOGENOMIC ANALYSES  ADAPTIVE RADIATION  ECOLOGICAL OPPORTUNITY  PLANT DIVERSIFICATION  ASIAN MONSOON  RADSEQ DATA  GENE TREES  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
Authors:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
View  |  Adobe PDF(1655Kb)  |  Favorite  |  View/Download：893/132  |  Submit date：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
Authors:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
View  |  Adobe PDF(2351Kb)  |  Favorite  |  View/Download：942/96  |  Submit date：2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny