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Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
Authors:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
Favorite  |  View/Download:41/0  |  Submit date:2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
Authors:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
Favorite  |  View/Download:30/0  |  Submit date:2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny  
Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
Authors:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
Favorite  |  View/Download:33/0  |  Submit date:2019/07/29
Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
Authors:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
Favorite  |  View/Download:60/0  |  Submit date:2019/07/29
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 222, 期号: 2, 页码: 1061-1075
Authors:  Mower, Jeffrey P.;  Ma, Peng-Fei;  Grewe, Felix;  Taylor, Alex;  Michael, Todd P.;  VanBuren, Robert;  Qiu, Yin-Long
Favorite  |  View/Download:31/0  |  Submit date:2019/06/24
evolutionary stasis  gene loss  inversion  Isoetes (quillworts)  Lycopodiaceae (clubmosses)  Lycopodiophyta (lycophytes)  plastid genome (plastome)  Selaginella (spikemosses)  
A new genus of temperate woody bamboos (Poaceae, Bambusoideae, Arundinarieae) from a limestone montane area of China 期刊论文
PHYTOKEYS, 2018, 期号: 109, 页码: 67-76
Authors:  Zhang, Yu-Xiao;  Ma, Peng-Fei;  Li, De-Zhu
Favorite  |  View/Download:306/0  |  Submit date:2018/11/12
Ampelocalamus  climbing bamboos  Hsuehochloa  new genus  
Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics 期刊论文
BMC PLANT BIOLOGY, 2017, 卷号: 17, 期号: 1, 页码: 260
Authors:  Ma, Peng-Fei;  Vorontsova, Maria S.;  Nanjarisoa, Olinirina Prisca;  Razanatsoa, Jacqueline;  Guo, Zhen-Hua;  Haevermans, Thomas;  Li, De-Zhu
View  |  Adobe PDF(1340Kb)  |  Favorite  |  View/Download:471/86  |  Submit date:2018/05/08
Temperate Woody Bamboos  Infrequent Flowering  Plastid Phylogenomics  Molecular Evolution  Rate Heterogeneity  Generation Time  
Comparative analyses of plastid genomes from fourteen Cornales species: inferences for phylogenetic relationships and genome evolution 期刊论文
BMC GENOMICS, 2017, 卷号: 18, 页码: 956
Authors:  Fu, Chao-Nan;  Li, Hong-Tao;  Milne, Richard;  Zhang, Ting;  Ma, Peng-Fei;  Yang, Jing;  Li, De-Zhu;  Gao, Lian-Ming
View  |  Adobe PDF(3094Kb)  |  Favorite  |  View/Download:356/3  |  Submit date:2018/05/08
Plastid Genome  Phylogenomics  Cornales  Alignment  Partitioning Schemes  Gene Loss  
Plastid phylogenomics and adaptive evolution of Gaultheria series Trichophyllae (Ericaceae), a Glade from sky islands of the Himalaya-Hengduan Mountains 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 110, 页码: 7-18
Authors:  Zhang, Ming-Ying;  Fritsch, Peter W.;  Ma, Peng-Fei;  Wang, Hong;  Lu, Lu;  Li, De -Zhu
View  |  Adobe PDF(5225Kb)  |  Favorite  |  View/Download:288/63  |  Submit date:2017/06/01
Plastid Genome  Character Evolution  Gaultheria  Phylogenetic Relationships  
In search of the phylogenetic affinity of the temperate woody bamboos from Madagascar, with description of a new species (Bambusoideae, Poaceae) 期刊论文
Journal of Systematics and Evolution, 2017, 卷号: 9999, 期号: 9999, 页码: 1-13
Authors:  Zhang, Yu-Xiao;  Ma, Peng-Fei;  Haevermans, Thomas;  Vorontsova, Maria S.;  Zhang, Ting;  Nanjarisoa, Olinirina Prisca;  Li, De-Zhu
View  |  Adobe PDF(11874Kb)  |  Favorite  |  View/Download:130/42  |  Submit date:2017/08/28