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Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
Authors:  Gregory W. Stull
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New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
Authors:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
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fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS  
The genome of Magnolia biondii Pamp. provides insights into the evolution of Magnoliales and biosynthesis of terpenoids 期刊论文
HORTICULTURE RESEARCH, 2021, 卷号: 8, 期号: 1, 页码: 38
Authors:  Dong,Shanshan;  Liu,Min;  Liu,Yang;  Chen,Fei;  Yang,Ting;  Chen,Lu;  Zhang,Xingtan;  Guo,Xing;  Fang,Dongming;  Li,Linzhou;  Deng,Tian;  Yao,Zhangxiu;  Lang,Xiaoan;  Gong,Yiqing;  Wu,Ernest;  Wang,Yaling;  Shen,Yamei;  Gong,Xun;  Liu,Huan;  Zhang,Shouzhou
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ALIGNMENT  IDENTIFICATION  PHYLOGENY  TOOL  ANGIOSPERMS  IMPROVEMENT  ANNOTATION  SUPPLEMENT  SEARCH  PLANTS  
Expansion and expression diversity of FAR1/FRS-like genes provides insights into flowering time regulation in roses 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 2, 页码: 173-179
Authors:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Cui,Wei-Hua;  Hu,Jin-Yong
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Rose  FAR1/FRS-Like genes  Gene family expansion  Flowering time  Shoot growth behavior  RED ELONGATED HYPOCOTYL3  TRANSCRIPTION FACTORS  ARABIDOPSIS FHY3  LIGHT  RESPONSES  BIOSYNTHESIS  DUPLICATION  PHYTOCHROME  EVOLUTION  ROKSN  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
Authors:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
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SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Rose without prickle: genomic insights linked to moisture adaptation 期刊论文
NATIONAL SCIENCE REVIEW, 2021, 卷号: 8, 期号: 12, 页码: nwab092
Authors:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Yang,Guo-Qian;  Cui,Wei-Hua;  Suo,Zhi-Quan;  Wang,Wei-Jia;  Sun,Yi-Bo;  Wang,Dan;  Cheng,Xin-Chao;  Li,Xu-Ming;  Dong,Xue;  Tang,Kai-Xue;  Li,De-Zhu;  Hu,Jin-Yong
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Rosa wichuraiana 'Basye's Thornless'  prickle-free  water storage  gene-regulatory-network (GRN)  QTL  TRICHOME DEVELOPMENT  PROVIDES INSIGHTS  FLOWERING TIME  TRANSCRIPTION  ARABIDOPSIS  INHERITANCE  EXPRESSION  INITIATION  TRAITS  GENE  
High-quality genome assembly of an important biodiesel plant, Euphorbia lathyris L. 期刊论文
DNA RESEARCH, 2021, 卷号: 28, 期号: 6, 页码: dsab022
Authors:  Wang,Mingcheng;  Gu,Zhijia;  Fu,Zhixi;  Jiang,Dechun
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caper spurge  biodiesel plant  genome assembly  nanopore sequencing  oil metabolism  PHYLOGENETIC ANALYSIS  FOSSIL-FUELS  ANNOTATION  TOOL  IDENTIFICATION  PREDICTION  DATABASE  SEEDS  GENE  
The Pharus latifolius genome bridges the gap of early grass evolution 期刊论文
PLANT CELL, 2021, 卷号: 33, 期号: 4, 页码: 846-864
Authors:  Ma,Peng-Fei;  Liu,Yun-Long;  Jin,Gui-Hua;  Liu,Jing-Xia;  Wu,Hong;  He,Jun;  Guo,Zhen-Hua;  Li,De-Zhu
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MADS-BOX GENES  MULTIPLE SEQUENCE ALIGNMENT  PHYLOGENETIC ANALYSIS  FLORAL DEVELOPMENT  MERISTEM IDENTITY  FRIZZY-PANICLE  ANCIENT  RICE  DUPLICATIONS  EXPRESSION  
Plastid phylogenomic insights into relationships of all flowering plant families 期刊论文
BMC BIOLOGY, 2021, 卷号: 19, 期号: 1, 页码: 232
Authors:  Li,Hong-Tao;  Luo,Yang;  Gan,Lu;  Ma,Peng-Fei;  Gao,Lian-Ming;  Yang,Jun-Bo;  Cai,Jie;  Gitzendanner,Matthew A.;  Fritsch,Peter W.;  Zhang,Ting;  Jin,Jian-Jun;  Zeng,Chun-Xia;  Wang,Hong;  Yu,Wen-Bin;  Zhang,Rong;  van der Bank,Michelle;  Olmstead,Richard G.;  Hollingsworth,Peter M.;  Chase,Mark W.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Yi,Ting-Shuang;  Li,De-Zhu
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Mesangiospermae  Tree of life  Interfamilial relationships  Plastome  PPA II  MULTIPLE SEQUENCE ALIGNMENT  EARLY DIVERSIFICATION  CHLOROPLAST GENOME  SEED PLANTS  SCALE DATA  ANGIOSPERMS  GENES  PHYLOGENETICS  RBCL  RESOLVES  
SMRT- and Illumina-based RNA-seq analyses unveil the ginsinoside biosynthesis and transcriptomic complexity in Panax notoginseng 期刊论文
SCIENTIFIC REPORTS, 2020
Authors:  Zhang, Dan;  Li, Wei;  Chen, Zhong-jian;  Wei, Fu-gang;  Liu, Yun-long;  Gao, Li-zhi
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