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Deciphering complex reticulate evolution of Asian Buddleja (Scrophulariaceae): insights into the taxonomy and speciation of polyploid taxa in the Sino-Himalayan region 期刊论文
ANNALS OF BOTANY, 2023
Authors:  Yang,Fengmao;  Ge,Jia;  Guo,Yongjie;  Olmstead,Richard;  Sun,Weibang
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Buddleja  phylogenomics  reticulate evolution  polyploidy  plastid genome  low-copy nuclear gene  HYBRIDIZATION  ALIGNMENT  DIVERSIFICATION  ALLOPOLYPLOIDY  PHYLOGENETICS  FRAMEWORK  NUCLEAR  ROBUST  FLOW  
Characteristics of plastid genomes in the genus Ceratostigma inhabiting arid habitats in China and their phylogenomic implications 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 303
Authors:  Zhao,Yu-Juan;  Liu,Jian;  Yin,Gen-Shen;  Gong,Xun
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Ceratostigma  Plastid genome  Comparative analysis  Interspecific relationship  Plumbaginaceae  COMPLETE CHLOROPLAST GENOME  MEKONG-SALWEEN DIVIDE  LIMONIUM-SINENSE  INVERTED REPEAT  SEQUENCE  EVOLUTION  DNA  PLUMBAGINACEAE  CONSEQUENCES  DIVERSITY  
Habitat-related plastome evolution in the mycoheterotrophic Neottia listeroides complex (Orchidaceae, Neottieae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 282
Authors:  Shao,Bing-Yi;  Wang,Mo-Zhu;  Chen,Si-Si;  Ya,Ji-Dong;  Jin,Xiao-Hua
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Mycoheterotrophy  Neottia listeroides complex  Chloroplast genomes  Micro-evolution  MULTIPLE SEQUENCE ALIGNMENT  SYMBIOTIC GERMINATION  PHYLOGENETIC ANALYSIS  SPECIES ORCHIDACEAE  EPIDENDROIDEAE  GENOME  GASTRODIEAE  REDUCTION  PLANTS  PHOTOSYNTHESIS  
New insights into intergeneric relationships of Hickeliinae (Poaceae: Bambusoideae) revealed by complete plastid genomes 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 125-132
Authors:  Rakotonasolo,Rivontsoa A.;  Dransfield,Soejatmi;  Haevermans,Thomas;  Ralimanana,Helene;  Vorontsova,Maria S.;  Zhou,Meng-Yuan;  Li,De-Zhu
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Bamboo  Hickeliinae  Madagascar  Paleotropical  Phylogenomics  Plastome  WOODY BAMBOOS  PHYLOGENETIC ANALYSIS  MADAGASCAR  DIVERSIFICATION  CLASSIFICATION  TEMPERATE  SEQUENCES  TOOLS  
Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
Authors:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
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Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence 期刊论文
PHYTOKEYS, 2023, 期号: 235, 页码: 211-236
Authors:  Ya,Ji-Dong;  Wang,Wan -Ting;  Liu,Yun-Long;  Jiang,Hong;  Han,Zhou-Dong;  Zhang,Ting;  Huang,Hua;  Cai,Jie;  Li,De-Zhu
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Neottia  Gastrochilus  Papilionanthe  Plastid phylogenomics  Taxonomy  Tibet  Yunnan  PLASTID GENOMES  EVOLUTION  VANDEAE  TRIBE  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
Authors:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
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Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES  
Plastome phylogenomics and morphological traits analyses provide new insights into the phylogenetic position, species delimitation and speciation of Triplostegia (Caprifoliaceae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 645
Authors:  Fu,Qing-Li;  Mo,Zhi-Qiong;  Xiang,Xiao-Guo;  Milne,Richard I.;  Jacquemyn,Hans;  Burgess,Kevin S.;  Sun,Ya-Nan;  Yan,Hua;  Qiu,Li;  Yang,Bo-Yun;  Tan,Shao-Lin
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Plastid genome  Phylogenomics  Speciation  Species delimitation  Triplostegia  FOREST DYNAMICS PLOT  HENGDUAN MOUNTAINS  ELEVATIONAL GRADIENT  SYSTEMATIC POSITION  RIVERINE BARRIER  DNA BARCODES  PLANT  DIPSACALES  SEQUENCE  DIVERSITY  
The Evolution of Mitochondrial Genomes between Two Cymbidium Sister Species: Dozens of Circular Chromosomes and the Maintenance and Deterioration of Genome Synteny 期刊论文
GENES, 2023, 卷号: 14, 期号: 4, 页码: 864
Authors:  Li,Xiaoling;  Zhe,Mengqing;  Huang,Yiwei;  Fan,Weishu;  Yang,Junbo;  Zhu,Andan
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mitogenome  multi-chromosomes  genome synteny  recombination  nutritional modes  PLANT MITOCHONDRIAL  ALIGNMENT  SEQUENCE  RATES  MYCOHETEROTROPHY  ORGANIZATION  CHLOROPLAST  FERTILE  FUNGI  
Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera 期刊论文
SCIENTIA HORTICULTURAE, 2023, 卷号: 313, 页码: 111909
Authors:  Shi,Wenbo;  Song,Weicai;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Citrus  Plastid genomics  Genomic structure  Sequence variation  Molecular markers  Phylogeny  Taxonomy  HORT. EX TANAKA  GENETIC DIVERSITY  MOLECULAR PHYLOGENY  SPACER REGION  JEJU ISLAND  SEQUENCE  DNA  ORIGIN  TAXONOMY  AURANTIOIDEAE