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Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera 期刊论文
SCIENTIA HORTICULTURAE, 2023, 卷号: 313, 页码: 111909
Authors:  Shi,Wenbo;  Song,Weicai;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Citrus  Plastid genomics  Genomic structure  Sequence variation  Molecular markers  Phylogeny  Taxonomy  HORT. EX TANAKA  GENETIC DIVERSITY  MOLECULAR PHYLOGENY  SPACER REGION  JEJU ISLAND  SEQUENCE  DNA  ORIGIN  TAXONOMY  AURANTIOIDEAE  
Comparative plastome genomics and phylogenetic relationships of the genus Trollius 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1293091
Authors:  Li,Jiaxin;  Du,Yan;  Xie,Lei;  Jin,Xiaohua;  Zhang,Zhirong;  Yang,Meiqing
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Trollius  plastome  comparative analysis  divergent hotspots  phylogenetic relationships  COMPLETE CHLOROPLAST GENOME  SEQUENCE  RANUNCULACEAE  REPEATS  PLANT  DNA  
自养种子植物IR丢失类群叶绿体基因组进化研究 学位论文
: 中国科学院大学, 2022
Authors:  王子洵
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比较基因组学，IR丢失，叶绿体基因组，替换速率，结构变异  comparative genomics, plastid genome, inverted repeat (IR), structural variation, substitution rate  
A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya, from Oceania 期刊论文
TAXON, 2022, 卷号: 71, 期号: 1, 页码: 25-51
Authors:  Chen,De-Kui;  Zhou,Xin-Mao;  Rothfels,Carl J.;  Shepherd,Lara D.;  Knapp,Ralf;  Zhang,Liang;  Lu,Ngan Thi;  Fan,Xue-Ping;  Wan,Xia;  Gao,Xin-Fen;  He,Hai;  Zhang,Li-Bing
View  |  Adobe PDF(8520Kb)  |  Favorite  |  View/Download：445/23  |  Submit date：2022/04/02
Huperzia  Lycophyte Phylogeny  Lycopodiella Serpentina  Phlegmariurus  Phylloglossum  Vascular Plant Evolution  Complete Chloroplast Genome  Lycopodiopsida Lycopodiaceae  Generic Classification  Spore Morphology  Early Evolution  Land Plants  Rbcl Gene  Huperzia  Sequence  Likelihood  
Comparative analyses of chloroplast genomes from Six Rhodiola species: variable DNA markers identification and phylogenetic relationships within the genus 期刊论文
BMC GENOMICS, 2022, 卷号: 23, 期号: 1, 页码: 577
Authors:  Zhao, Kaihui;  Li, Lianqiang;  Quan, Hong;  Yang, Junbo;  Zhang, Zhirong;  Liao, Zhihua;  Lan, Xiaozhong
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Rhodiola  Chloroplast genome  Divergent hotspots  Phylogenetic analysis  GROUP CLASSIFICATION  FLOWERING PLANTS  PLASTID GENOMES  TRNH-PSBA  SEQUENCE  EVOLUTION  FAMILIES  REPEATS  UPDATE  ORDERS  
Does IR-loss promote plastome structural variation and sequence evolution? 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 888049
Authors:  Wang, Zi-Xun;  Wang, Ding-Jie;  Yi, Ting-Shuang
View  |  Adobe PDF(2423Kb)  |  Favorite  |  View/Download：140/14  |  Submit date：2024/08/21
plastid genome evolution  structural variation  inverted repeat region loss  substitution rate  comparative genomics  CHLOROPLAST GENOME SEQUENCE  INVERTED REPEAT  NUCLEOTIDE SUBSTITUTION  PHYLOGENETIC ANALYSIS  MOLECULAR EVOLUTION  NONCODING RNAS  RATES  REARRANGEMENTS  ORGANIZATION  CUPRESSOPHYTES  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
Authors:  Gregory W. Stull
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The complete plastomes of two flowering epiparasites (Phacellaria glomerata and P. compressa): Gene content, organization, and plastome degradation 期刊论文
GENOMICS, 2021, 卷号: 113, 期号: 2, 页码: 447-455
Authors:  Guo,Xiaorong;  Liu,Changkun;  Wang,Hengchang;  Zhang,Guangfei;  Yan,Hanjing;  Jin,Lei;  Su,Wenhua;  Ji,Yunheng
View  |  Adobe PDF(7767Kb)  |  Favorite  |  View/Download：351/46  |  Submit date：2022/04/02
Amphorogynaceae  Gene loss  Mistletoe  Pseudogenization  Taxonomy  Santalales  
Plastome phylogenomics of the East Asian endemic genus Dobinea 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 35-42
Authors:  Liu,Changkun;  Yang,Jin;  Jin,Lei;  Wang,Shuying;  Yang,Zhenyan;  Ji,Yunheng
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Neo-endemism  Divergence  Dobinea delavayi  Dobinea vulgaris  Dobineeae  Anacardiaceae  QUANTITATIVE RECONSTRUCTION  MOLECULAR PHYLOGENETICS  EVOLUTIONARY HISTORY  CHLOROPLAST GENOME  SAPINDALES  MONSOON  NUCLEAR  CHINA  DIVERSIFICATION  ANACARDIACEAE  
An updated tribal classification of Lamiaceae based on plastome phylogenomics 期刊论文
BMC BIOLOGY, 2021, 卷号: 19, 期号: 1, 页码: 2
Authors:  Zhao,Fei;  Chen,Ya-Ping;  Salmaki,Yasaman;  Drew,Bryan T.;  Wilson,Trevor C.;  Scheen,Anne-Cathrine;  Celep,Ferhat;  Braeuchler,Christian;  Bendiksby,Mika;  Wang,Qiang;  Min,Dao-Zhang;  Peng,Hua;  Olmstead,Richard G.;  Li,Bo;  Xiang,Chun-Lei
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Lamiaceae  Lamioideae  Mints  Phylogenomics  Tribal relationships  COMPLETE CHLOROPLAST GENOME  HAWAIIAN ENDEMIC MINTS  MOLECULAR PHYLOGENY  POLLEN MORPHOLOGY  CLERODENDRUM LAMIACEAE  LAMIOIDEAE LAMIACEAE  STACHYDEAE LAMIACEAE  CHARACTER EVOLUTION  STAMINAL EVOLUTION  PERICARP STRUCTURE