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中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
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Phylogenomic insights into the reticulate evolution of Camellia sect. Paracamellia Sealy (Theaceae)
期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023
Authors:
Qin,Sheng-Yuan
;
Chen,Kai
;
Zhang,Wen-Ju
;
Xiang,Xiao-Guo
;
Zuo,Zheng-Yu
;
Guo,Cen
;
Zhao,Yao
;
Li,Lin-Feng
;
Wang,Yu-Guo
;
Song,Zhi-Ping
;
Yang,Ji
;
Yang,Xiao-Qiang
;
Zhang,Jian
;
Jin,Wei-Tao
;
Wen,Qiang
;
Zhao,Song-Zi
;
Chen,Jia-Kuan
;
Li,De-Zhu
;
Rong,Jun
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Submit date:2024/07/10
Camellia oleifera
hybridization
phylogenomics
plastome
polyploidization
transcriptome
EVERGREEN BROADLEAVED FORESTS
HISTORY
DYNAMICS
OLEIFERA
CHINA
PHYLOGEOGRAPHY
ALIGNMENT
TREE
Phylotranscriptomics of Swertiinae (Gentianaceae) reveals that key floral traits are not phylogenetically correlated
期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023, 卷号: 65, 期号: 6, 页码: 1490-1504
Authors:
Chen,Chunlin
;
Ruhfel,Brad R.
;
Li,Jialiang
;
Wang,Zefu
;
Zhang,Lushui
;
Zhang,Lei
;
Mao,Xingxing
;
Wang,Ji
;
He,Dashan
;
Luo,Yue
;
Hu,Quanjun
;
Duan,Yuanwen
;
Xu,Xiaoting
;
Xi,Zhenxiang
;
Liu,Jianquan
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Submit date:2024/07/10
ancient hybridization
floral diversity
Gentianaceae
phylogenomics
Qinghai-Tibet Plateau
subtribe Swertiinae
ADAPTIVE RADIATION
SEQUENCE
EVOLUTION
PHYLOGENY
DIVERSIFICATION
GENTIANELLA
GENTIANINAE
NUCLEAR
SPECIATION
INFERENCE
Deep reticulation: the long legacy of hybridization in vascular plant evolution
期刊论文
PLANT JOURNAL, 2023, 卷号: 114, 期号: 4, 页码: 743-766
Authors:
Stull,Gregory W.
;
Pham,Kasey K.
;
Soltis,Pamela S.
;
Soltis,Douglas E.
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Submit date:2024/07/10
ancient hybridization
gene flow
phylogenomics
polyploidy
reticulation
vascular plants
CHLOROPLAST DNA
GENE FLOW
HYBRID SPECIATION
ANGIOSPERM DIVERSIFICATION
NATURAL HYBRIDIZATION
PHYLOGENETIC ANALYSES
SEED PLANTS
WHITE OAKS
SCALE DATA
POLYPLOIDY
Home at last: Molecular phylogenetic analyses support subsuming Metastachydium within Phlomoides (Lamiaceae)
期刊论文
TAXON, 2023
Authors:
Zhao,Yue
;
Zhao,Fei
;
Salmaki,Yasaman
;
Paton,Alan
;
Cai,Jie
;
Drew,Bryan T.
;
Mahmoudi,Chonour
;
Efimov,Petr
;
Turginov,Orzimat T.
;
Liang,Cun-Zhu
;
Chen,Ya-Ping
;
Xiang,Chun-Lei
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Submit date:2024/07/10
Central Asia
Lamioideae
nrITS
Phlomideae
Phlomis
plastome phylogenomics
COMPLETE CHLOROPLAST GENOME
PLASTID DNA
LEPECHINIA LAMIACEAE
LAMIOIDEAE LAMIACEAE
CHARACTER EVOLUTION
NUCLEAR
CLASSIFICATION
POSITION
ORIGIN
GENERA
Phylogenomics resolves the rediscovered Himalayan endemic Brachymeniopsis gymnostoma (Bryophyta, Funariaceae), as a species of Entosthodon, prompting also the transfer of Clavitheca poeltii
期刊论文
TAXON, 2023, 卷号: 72, 期号: 6, 页码: 1216-1227
Authors:
Zhang,Li
;
Zuo,Qin
;
Ma,Wen-Zhang
;
Shevock,James R.
;
Patel,Nikisha
;
Johnson,Matthew
;
Medina,Rafael
;
Wilding,Nicholas
;
Goffinet,Bernard
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Submit date:2024/07/10
mosses
nomenclature
phylogenomic reference
taxonomy
RAPID RADIATION
MOSS CALYPTRA
PHYSCOMITRELLA
REJECTS
CUTICLE
Phylogenomics and morphological evolution of the mega-diverse genus Artemisia (Asteraceae: Anthemideae): implications for its circumscription and infrageneric taxonomy
期刊论文
ANNALS OF BOTANY, 2023, 卷号: 131, 期号: 5, 页码: 867-883
Authors:
Jiao,Bohan
;
Chen,Chen
;
Wei,Meng
;
Niu,Guohao
;
Zheng,Jiye
;
Zhang,Guojin
;
Shen,Jiahao
;
Vitales,Daniel
;
Valles,Joan
;
Verloove,Filip
;
Erst,Andrey S.
;
Soejima,Akiko
;
Mehregan,Iraj
;
Kokubugata,Goro
;
Chung,Gyu-Young
;
Ge,Xuejun
;
Gao,Lianming
;
Yuan,Yuan
;
Joly,Cyprien
;
Jabbour,Florian
;
Wang,Wei
;
Shultz,Leila M.
;
Gao,Tiangang
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Submit date:2024/05/09
Artemisia
phylogenomics
taxonomy
morphological evolution
generic delimitation
infrageneric taxonomy
genome skimming
NUCLEAR RIBOSOMAL DNA
MOLECULAR PHYLOGENY
SUBGENUS TRIDENTATAE
ALLIES ANTHEMIDEAE
ENDEMIC ARTEMISIA
TREE
L.
CLASSIFICATION
GENERA
ORIGIN
Deciphering complex reticulate evolution of Asian Buddleja (Scrophulariaceae): insights into the taxonomy and speciation of polyploid taxa in the Sino-Himalayan region
期刊论文
ANNALS OF BOTANY, 2023
Authors:
Yang,Fengmao
;
Ge,Jia
;
Guo,Yongjie
;
Olmstead,Richard
;
Sun,Weibang
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Submit date:2024/05/09
Buddleja
phylogenomics
reticulate evolution
polyploidy
plastid genome
low-copy nuclear gene
HYBRIDIZATION
ALIGNMENT
DIVERSIFICATION
ALLOPOLYPLOIDY
PHYLOGENETICS
FRAMEWORK
NUCLEAR
ROBUST
FLOW
New insights into intergeneric relationships of Hickeliinae (Poaceae: Bambusoideae) revealed by complete plastid genomes
期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 125-132
Authors:
Rakotonasolo,Rivontsoa A.
;
Dransfield,Soejatmi
;
Haevermans,Thomas
;
Ralimanana,Helene
;
Vorontsova,Maria S.
;
Zhou,Meng-Yuan
;
Li,De-Zhu
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Submit date:2024/05/09
Bamboo
Hickeliinae
Madagascar
Paleotropical
Phylogenomics
Plastome
WOODY BAMBOOS
PHYLOGENETIC ANALYSIS
MADAGASCAR
DIVERSIFICATION
CLASSIFICATION
TEMPERATE
SEQUENCES
TOOLS
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants
期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
Authors:
Tyszka,Alexa S.
;
Bretz,Eric C.
;
Robertson,Holly M.
;
Woodcock-Girard,Miles D.
;
Ramanauskas,Karolis
;
Larson,Drew A.
;
Stull,Gregory W.
;
Walker,Joseph F.
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Submit date:2024/05/09
phylogenetics
plastome
mitochondrial genome
chloroplast genome
phylogenomics
combinability
phylogenetic conflict
MITOCHONDRIAL GENOMES
PENALIZED LIKELIHOOD
NUCLEOTIDE-SEQUENCES
EXTANT GYMNOSPERMS
DYNAMIC EVOLUTION
CHLOROPLAST DNA
SEED PLANTS
GENE
RATES
RECOMBINATION
Editorial: Rise to the challenges in plastome phylogenomics
期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1200302
Authors:
Dong,Wenpan
;
Gao,Lianming
;
Xu,Chao
;
Song,Yu
;
Poczai,Peter
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Submit date:2024/05/09
plastome phylogenomics
incomplete lineage sorting
introgression
species tree
phylogenetic discordance