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Characterization of the complete chloroplast genome of Amsonia elliptica (Apocynaceae)
Kim,Yongsung; Nam,Bo-Mi; Kim,Iseon; Deng,Tao; Kim,Changkyun
2023
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
ISSN2380-2359
Volume8Issue:3Pages:461-465
AbstractAmsonia elliptica (Apocynaceae), endangered species in Korea, is a perennial herb that is economically important as traditional medicine and used as ornamentals. Natural populations of this species are facing extinction due to small population size and isolated distribution. Here, we report the complete chloroplast (cp) genome of A. elliptica using Illumina HiSeq sequencing and its phylogenetic position in subfamily Rauvolfioideae based on 20 Apocynaceae cp genomes. The cp genome of A. elliptica was 154,242 bp in length with a pair of inverted repeats of 25,711 bp, separated by large single-copy and small single-copy regions of 85,382 bp and 17,438 bp, respectively. Our phylogenomic analyses revealed that A. elliptica was closely related to Rhazya stricta in Rauvolfioideae (Apocynaceae).
KeywordAmsonia elliptica Apocynaceae chloroplast genome endangered species phylogenomic analyses PLASTOME SEQUENCE CHOICE
Subject AreaGenetics & Heredity
DOI10.1080/23802359.2023.2192834
WOS IDWOS:000959172300001
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Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/74889
Collection中国科学院昆明植物研究所
Recommended Citation
GB/T 7714
Kim,Yongsung,Nam,Bo-Mi,Kim,Iseon,et al. Characterization of the complete chloroplast genome of Amsonia elliptica (Apocynaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2023,8(3):461-465.
APA Kim,Yongsung,Nam,Bo-Mi,Kim,Iseon,Deng,Tao,&Kim,Changkyun.(2023).Characterization of the complete chloroplast genome of Amsonia elliptica (Apocynaceae).MITOCHONDRIAL DNA PART B-RESOURCES,8(3),461-465.
MLA Kim,Yongsung,et al."Characterization of the complete chloroplast genome of Amsonia elliptica (Apocynaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 8.3(2023):461-465.
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