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A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya, from Oceania 期刊论文
TAXON, 2022, 卷号: 71, 期号: 1, 页码: 25-51
Authors:  Chen,De-Kui;  Zhou,Xin-Mao;  Rothfels,Carl J.;  Shepherd,Lara D.;  Knapp,Ralf;  Zhang,Liang;  Lu,Ngan Thi;  Fan,Xue-Ping;  Wan,Xia;  Gao,Xin-Fen;  He,Hai;  Zhang,Li-Bing
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Huperzia  Lycophyte Phylogeny  Lycopodiella Serpentina  Phlegmariurus  Phylloglossum  Vascular Plant Evolution  Complete Chloroplast Genome  Lycopodiopsida Lycopodiaceae  Generic Classification  Spore Morphology  Early Evolution  Land Plants  Rbcl Gene  Huperzia  Sequence  Likelihood  
Draft genome of the herbaceous bamboo Raddia distichophylla 期刊论文
G3-GENES GENOMES GENETICS, 2021, 卷号: 11, 期号: 2, 页码: jkaa049
Authors:  Li,Wei;  Shi,Cong;  Li,Kui;  Zhang,Qun-Jie;  Tong,Yan;  Zhang,Yun;  Wang,Jun;  Clark,Lynn;  Gao,Li-Zhi
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bamboos  Raddia distichophylla  whole-genome sequencing  DE-NOVO IDENTIFICATION  SSR-MARKERS  SEQUENCE  RNA  ALIGNMENT  POACEAE  ANNOTATION  PROGRAM  PROTEIN  PLANTS  
FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles (vol 105, 116, 2020) 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 107, 期号: 1, 页码: 129-132
Authors:  Polme,Sergei;  Abarenkov,Kessy;  Henrik Nilsson,R.;  Lindahl,Bjorn D.;  Clemmensen,Karina Engelbrecht;  Kauserud,Havard;  Nguyen,Nhu;  Kjoller,Rasmus;  Bates,Scott T.;  Baldrian,Petr;  Froslev,Tobias Guldberg;  Adojaan,Kristjan;  Vizzini,Alfredo;  Suija,Ave;  Pfister,Donald;  Baral,Hans-Otto;  Jarv,Helle;  Madrid,Hugo;  Norden,Jenni;  Liu,Jian-Kui;  Pawlowska,Julia;  Poldmaa,Kadri;  Partel,Kadri;  Runnel,Kadri;  Hansen,Karen;  Larsson,Karl-Henrik;  Hyde,Kevin David;  Sandoval-Denis,Marcelo;  Smith,Matthew E.;  Toome-Heller,Merje;  Wijayawardene,Nalin N.;  Menolli,Nelson,Jr.;  Reynolds,Nicole K.;  Drenkhan,Rein;  Maharachchikumbura,Sajeewa S. N.;  Gibertoni,Tatiana B.;  Laessoe,Thomas;  Davis,William;  Tokarev,Yuri;  Corrales,Adriana;  Soares,Adriene Mayra;  Agan,Ahto;  Machado,Alexandre Reis;  Arguelles-Moyao,Andres;  Detheridge,Andrew;  de Meiras-Ottoni,Angelina;  Verbeken,Annemieke;  Dutta,Arun Kumar;  Cui,Bao-Kai;  Pradeep,C. K.;  Marin,Cesar;  Stanton,Daniel;  Gohar,Daniyal;  Wanasinghe,Dhanushka N.;  Otsing,Eveli;  Aslani,Farzad;  Griffith,Gareth W.;  Lumbsch,Thorsten H.;  Grossart,Hans-Peter;  Masigol,Hossein;  Timling,Ina;  Hiiesalu,Inga;  Oja,Jane;  Kupagme,John Y.;  Geml,Jozsef;  Alvarez-Manjarrez,Julieta;  Ilves,Kai;  Loit,Kaire;  Adamson,Kalev;  Nara,Kazuhide;  Kungas,Kati;  Rojas-Jimenez,Keilor;  Bitenieks,Kriss;  Irinyi,Laszlo;  Nagy,Laszlo G.;  Soonvald,Liina;  Zhou,Li-Wei;  Wagner,Lysett;  Aime,M. Catherine;  Opik,Maarja;  Mujica,Maria Isabel;  Metsoja,Martin;  Ryberg,Martin;  Vasar,Martti;  Murata,Masao;  Nelsen,Matthew P.;  Cleary,Michelle;  Samarakoon,Milan C.;  Doilom,Mingkwan;  Bahram,Mohammad;  Hagh-Doust,Niloufar;  Dulya,Olesya;  Johnston,Peter;  Kohout,Petr;  Chen,Qian;  Tian,Qing;  Nandi,Rajasree;  Amiri,Rasekh;  Perera,Rekhani Hansika;  dos Santos Chikowski,Renata;  Mendes-Alvarenga,Renato L.;  Garibay-Orijel,Roberto;  Gielen,Robin;  Phookamsak,Rungtiwa;  Jayawardena,Ruvishika S.;  Rahimlou,Saleh;  Karunarathna,Samantha C.;  Tibpromma,Saowaluck;  Brown,Shawn P.;  Sepp,Siim-Kaarel;  Mundra,Sunil;  Luo,Zhu-Hua;  Bose,Tanay;  Vahter,Tanel;  Netherway,Tarquin;  Yang,Teng;  May,Tom;  Varga,Torda;  Li,Wei;  Coimbra,Victor Rafael Matos;  de Oliveira,Virton Rodrigo Targino;  de Lima,Vitor Xavier;  Mikryukov,Vladimir S.;  Lu,Yongzhong;  Matsuda,Yosuke;  Miyamoto,Yumiko;  Koljalg,Urmas;  Tedersoo,Leho
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Large-Scale Characterization of the Soil Microbiome in Ancient Tea Plantations Using High-Throughput 16S rRNA and Internal Transcribed Spacer Amplicon Sequencing 期刊论文
FRONTIERS IN MICROBIOLOGY, 2021, 卷号: 12, 页码: 745225
Authors:  Kui,Ling;  Xiang,Guisheng;  Wang,Ya;  Wang,Zijun;  Li,Guorong;  Li,Dawei;  Yan,Jing;  Ye,Shuang;  Wang,Chunping;  Yang,Ling;  Zhang,Shiyu;  Zhang,Shuangyan;  Zhou,Ling;  Gui,Heng;  Xu,Jianchu;  Chen,Wei;  Zhang,Jun;  Huang,Tingyuan;  Majeed,Aasim;  Sheng,Jun;  Dong,Yang
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Camellia sinensis var  assamica  microbiome  function  ancient tea plantations  16S and ITS rRNA  FUNGAL COMMUNITIES  CAMELLIA-SINENSIS  BACTERIAL COMMUNITIES  ALTITUDINAL GRADIENT  ORCHARD SOILS  ACIDIFICATION  RHIZOSPHERE  DIVERSITY  GROWTH  NITROGEN  
The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
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rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Psiloboletinus is an independent genus sister to Suillus 期刊论文
MYCOLOGIA, 2020, 卷号: 112, 期号: 1, 页码: 185-196
Authors:  Wu, Gang;  Wu, Kui;  Qi, Liang-Liang;  Morozova, Olga, V;  Alexandrova, Alina, V;  Gorbunova, Irina A.;  Li, Yu;  Liu, Jian-Wei;  Yang, Zhu L.
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Larch  multilocus molecular phylogeny  Phylloporus  Suillaceae  taxonomy  
The draft genome sequence of an upland wild rice species, Oryza granulata 期刊论文
SCIENTIFIC DATA, 2020
Authors:  Shi, Cong;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Tong, Yan;  Li, Kui;  Liu, Yun-Long;  Gao, Li-Zhi
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Fungal diversity notes 1277-1386: taxonomic and phylogenetic contributions to fungal taxa 期刊论文
FUNGAL DIVERSITY, 2020
Authors:  Yuan, Hai-Sheng;  Lu, Xu;  Dai, Yu-Cheng;  Hyde, Kevin D.;  Kan, Yu-He;  Kusan, Ivana;  He, Shuang-Hui;  Liu, Ning-Guo;  Sarma, V. Venkateswara;  Zhao, Chang-Lin;  Cui, Bao-Kai;  Yousaf, Nousheen;  Sun, Guangyu;  Liu, Shu-Yan;  Wu, Fang;  Lin, Chuan-Gen;  Dayarathne, Monika C.;  Gibertoni, Tatiana Baptista;  Conceicao, Lucas B.;  Garibay-Orijel, Roberto;  Villegas-Rios, Margarita;  Salas-Lizana, Rodolfo;  Wei, Tie-Zheng;  Qiu, Jun-Zhi;  Yu, Ze-Fen;  Phookamsak, Rungtiwa;  Zeng, Ming;  Paloi, Soumitra;  Bao, Dan-Feng;  Abeywickrama, Pranami D.;  Wei, De-Ping;  Yang, Jing;  Manawasinghe, Ishara S.;  Harishchandra, Dulanjalee;  Brahmanage, Rashika S.;  de Silva, Nimali I.;  Tennakoon, Danushka S.;  Karunarathna, Anuruddha;  Gafforov, Yusufjon;  Pem, Dhandevi;  Zhang, Sheng-Nan;  de Azevedo Santiago, Andre L. C. M.;  Bezerra, Jadson Diogo Pereira;  Dima, Balint;  Acharya, Krishnendu;  Alvarez-Manjarrez, Julieta;  Bahkali, Ali H.;  Bhatt, Vinod K.;  Brandrud, Tor Erik;  Bulgakov, Timur S.;  Camporesi, E.;  Cao, Ting;  Chen, Yu-Xi;  Chen, Yuan-Yuan;  Devadatha, Bandarupalli;  Elgorban, Abdallah M.;  Fan, Long-Fei;  Du, Xing;  Gao, Liu;  Goncalves, Camila Melo;  Gusmao, Luis F. P.;  Huanraluek, Naruemon;  Jadan, Margita;  Jayawardena, Ruvishika S.;  Khalid, Abdul Nasir;  Langer, Ewald;  Lima, Diogo X.;  de Lima-Junior, Nelson Correia;  de Lira, Carla Rejane Sousa;  Liu, Jian-Kui (Jack);  Liu, Shun;  Lumyong, Saisamorn;  Luo, Zong-Long;  Matocec, Neven;  Niranjan, M.;  Oliveira-Filho, Jose Ribamar Costa;  Papp, Viktor;  Perez-Pazos, Eduardo;  Phillips, Alan J. L.;  Qiu, Peng-Lei;  Ren, Yihua;  Ruiz, Rafael F. Castaneda;  Semwal, Kamal C.;  Soop, Karl;  de Souza, Carlos A. F.;  Souza-Motta, Cristina Maria;  Sun, Li-Hua;  Xie, Meng-Le;  Yao, Yi-Jian;  Zhao, Qi;  Zhou, Li-Wei
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The Chromosome-Level Reference Genome of Tea Tree Unveils Recent Bursts of Non-autonomous LTR Retrotransposons in Driving Genome Size Evolution 期刊论文
MOLECULAR PLANT, 2020
Authors:  Zhang, Qun-Jie;  Li, Wei;  Li, Kui;  Nan, Hong;  Shi, Cong;  Zhang, Yun;  Dai, Zhang-Yan;  Lin, Yang-Lei;  Yang, Xiao-Lan;  Tong, Yan;  Zhang, Dan;  Lu, Cui;  Feng, Li-Ying;  Wang, Chen-Feng;  Liu, Xiao-Xin;  Huang, Jian-An;  Jiang, Wen-Kai;  Wang, Xing-Hua;  Zhang, Xing-Cai;  Eichler, Evan E.;  Liu, Zhong-Hua;  Gao, Li-Zhi
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Taxonomy and phylogeny of hyaline-spored coelomycetes 期刊论文
FUNGAL DIVERSITY, 2020
Authors:  Li, Wen-Jing;  McKenzie, Eric H. C.;  Liu, Jian-Kui (Jack);  Bhat, D. Jayarama;  Dai, Dong-Qin;  Camporesi, Erio;  Tian, Qing;  Maharachchikumbura, Sajeewa S. N.;  Luo, Zong-Long;  Shang, Qiu-Ju;  Zhang, Jin-Feng;  Tangthirasunun, Narumon;  Karunarathna, Samantha C.;  Xu, Jian-Chu;  Hyde, Kevin D.
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