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A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya, from Oceania 期刊论文
TAXON, 2022, 卷号: 71, 期号: 1, 页码: 25-51
Authors:  Chen,De-Kui;  Zhou,Xin-Mao;  Rothfels,Carl J.;  Shepherd,Lara D.;  Knapp,Ralf;  Zhang,Liang;  Lu,Ngan Thi;  Fan,Xue-Ping;  Wan,Xia;  Gao,Xin-Fen;  He,Hai;  Zhang,Li-Bing
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Huperzia  lycophyte phylogeny  Lycopodiella serpentina  Phlegmariurus  Phylloglossum  vascular plant evolution  COMPLETE CHLOROPLAST GENOME  LYCOPODIOPSIDA LYCOPODIACEAE  GENERIC CLASSIFICATION  SPORE MORPHOLOGY  EARLY EVOLUTION  LAND PLANTS  RBCL GENE  HUPERZIA  SEQUENCE  LIKELIHOOD  
Large-Scale Characterization of the Soil Microbiome in Ancient Tea Plantations Using High-Throughput 16S rRNA and Internal Transcribed Spacer Amplicon Sequencing 期刊论文
FRONTIERS IN MICROBIOLOGY, 2021, 卷号: 12, 页码: 745225
Authors:  Kui,Ling;  Xiang,Guisheng;  Wang,Ya;  Wang,Zijun;  Li,Guorong;  Li,Dawei;  Yan,Jing;  Ye,Shuang;  Wang,Chunping;  Yang,Ling;  Zhang,Shiyu;  Zhang,Shuangyan;  Zhou,Ling;  Gui,Heng;  Xu,Jianchu;  Chen,Wei;  Zhang,Jun;  Huang,Tingyuan;  Majeed,Aasim;  Sheng,Jun;  Dong,Yang
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Camellia sinensis var  assamica  microbiome  function  ancient tea plantations  16S and ITS rRNA  FUNGAL COMMUNITIES  CAMELLIA-SINENSIS  BACTERIAL COMMUNITIES  ALTITUDINAL GRADIENT  ORCHARD SOILS  ACIDIFICATION  RHIZOSPHERE  DIVERSITY  GROWTH  NITROGEN  
Draft genome of the herbaceous bamboo Raddia distichophylla 期刊论文
G3-GENES GENOMES GENETICS, 2021, 卷号: 11, 期号: 2, 页码: jkaa049
Authors:  Li,Wei;  Shi,Cong;  Li,Kui;  Zhang,Qun-Jie;  Tong,Yan;  Zhang,Yun;  Wang,Jun;  Clark,Lynn;  Gao,Li-Zhi
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bamboos  Raddia distichophylla  whole-genome sequencing  DE-NOVO IDENTIFICATION  SSR-MARKERS  SEQUENCE  RNA  ALIGNMENT  POACEAE  ANNOTATION  PROGRAM  PROTEIN  PLANTS  
FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles (vol 105, 116, 2020) 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 107, 期号: 1, 页码: 129-132
Authors:  Polme,Sergei;  Abarenkov,Kessy;  Henrik Nilsson,R.;  Lindahl,Bjorn D.;  Clemmensen,Karina Engelbrecht;  Kauserud,Havard;  Nguyen,Nhu;  Kjoller,Rasmus;  Bates,Scott T.;  Baldrian,Petr;  Froslev,Tobias Guldberg;  Adojaan,Kristjan;  Vizzini,Alfredo;  Suija,Ave;  Pfister,Donald;  Baral,Hans-Otto;  Jarv,Helle;  Madrid,Hugo;  Norden,Jenni;  Liu,Jian-Kui;  Pawlowska,Julia;  Poldmaa,Kadri;  Partel,Kadri;  Runnel,Kadri;  Hansen,Karen;  Larsson,Karl-Henrik;  Hyde,Kevin David;  Sandoval-Denis,Marcelo;  Smith,Matthew E.;  Toome-Heller,Merje;  Wijayawardene,Nalin N.;  Menolli,Nelson,Jr.;  Reynolds,Nicole K.;  Drenkhan,Rein;  Maharachchikumbura,Sajeewa S. N.;  Gibertoni,Tatiana B.;  Laessoe,Thomas;  Davis,William;  Tokarev,Yuri;  Corrales,Adriana;  Soares,Adriene Mayra;  Agan,Ahto;  Machado,Alexandre Reis;  Arguelles-Moyao,Andres;  Detheridge,Andrew;  de Meiras-Ottoni,Angelina;  Verbeken,Annemieke;  Dutta,Arun Kumar;  Cui,Bao-Kai;  Pradeep,C. K.;  Marin,Cesar;  Stanton,Daniel;  Gohar,Daniyal;  Wanasinghe,Dhanushka N.;  Otsing,Eveli;  Aslani,Farzad;  Griffith,Gareth W.;  Lumbsch,Thorsten H.;  Grossart,Hans-Peter;  Masigol,Hossein;  Timling,Ina;  Hiiesalu,Inga;  Oja,Jane;  Kupagme,John Y.;  Geml,Jozsef;  Alvarez-Manjarrez,Julieta;  Ilves,Kai;  Loit,Kaire;  Adamson,Kalev;  Nara,Kazuhide;  Kungas,Kati;  Rojas-Jimenez,Keilor;  Bitenieks,Kriss;  Irinyi,Laszlo;  Nagy,Laszlo G.;  Soonvald,Liina;  Zhou,Li-Wei;  Wagner,Lysett;  Aime,M. Catherine;  Opik,Maarja;  Mujica,Maria Isabel;  Metsoja,Martin;  Ryberg,Martin;  Vasar,Martti;  Murata,Masao;  Nelsen,Matthew P.;  Cleary,Michelle;  Samarakoon,Milan C.;  Doilom,Mingkwan;  Bahram,Mohammad;  Hagh-Doust,Niloufar;  Dulya,Olesya;  Johnston,Peter;  Kohout,Petr;  Chen,Qian;  Tian,Qing;  Nandi,Rajasree;  Amiri,Rasekh;  Perera,Rekhani Hansika;  dos Santos Chikowski,Renata;  Mendes-Alvarenga,Renato L.;  Garibay-Orijel,Roberto;  Gielen,Robin;  Phookamsak,Rungtiwa;  Jayawardena,Ruvishika S.;  Rahimlou,Saleh;  Karunarathna,Samantha C.;  Tibpromma,Saowaluck;  Brown,Shawn P.;  Sepp,Siim-Kaarel;  Mundra,Sunil;  Luo,Zhu-Hua;  Bose,Tanay;  Vahter,Tanel;  Netherway,Tarquin;  Yang,Teng;  May,Tom;  Varga,Torda;  Li,Wei;  Coimbra,Victor Rafael Matos;  de Oliveira,Virton Rodrigo Targino;  de Lima,Vitor Xavier;  Mikryukov,Vladimir S.;  Lu,Yongzhong;  Matsuda,Yosuke;  Miyamoto,Yumiko;  Koljalg,Urmas;  Tedersoo,Leho
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The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
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rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Psiloboletinus is an independent genus sister to Suillus 期刊论文
MYCOLOGIA, 2020, 卷号: 112, 期号: 1, 页码: 185-196
Authors:  Wu, Gang;  Wu, Kui;  Qi, Liang-Liang;  Morozova, Olga, V;  Alexandrova, Alina, V;  Gorbunova, Irina A.;  Li, Yu;  Liu, Jian-Wei;  Yang, Zhu L.
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Larch  multilocus molecular phylogeny  Phylloporus  Suillaceae  taxonomy  
The draft genome sequence of an upland wild rice species, Oryza granulata 期刊论文
SCIENTIFIC DATA, 2020
Authors:  Shi, Cong;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Tong, Yan;  Li, Kui;  Liu, Yun-Long;  Gao, Li-Zhi
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Fungal diversity notes 1277-1386: taxonomic and phylogenetic contributions to fungal taxa 期刊论文
FUNGAL DIVERSITY, 2020
Authors:  Yuan, Hai-Sheng;  Lu, Xu;  Dai, Yu-Cheng;  Hyde, Kevin D.;  Kan, Yu-He;  Kusan, Ivana;  He, Shuang-Hui;  Liu, Ning-Guo;  Sarma, V. Venkateswara;  Zhao, Chang-Lin;  Cui, Bao-Kai;  Yousaf, Nousheen;  Sun, Guangyu;  Liu, Shu-Yan;  Wu, Fang;  Lin, Chuan-Gen;  Dayarathne, Monika C.;  Gibertoni, Tatiana Baptista;  Conceicao, Lucas B.;  Garibay-Orijel, Roberto;  Villegas-Rios, Margarita;  Salas-Lizana, Rodolfo;  Wei, Tie-Zheng;  Qiu, Jun-Zhi;  Yu, Ze-Fen;  Phookamsak, Rungtiwa;  Zeng, Ming;  Paloi, Soumitra;  Bao, Dan-Feng;  Abeywickrama, Pranami D.;  Wei, De-Ping;  Yang, Jing;  Manawasinghe, Ishara S.;  Harishchandra, Dulanjalee;  Brahmanage, Rashika S.;  de Silva, Nimali I.;  Tennakoon, Danushka S.;  Karunarathna, Anuruddha;  Gafforov, Yusufjon;  Pem, Dhandevi;  Zhang, Sheng-Nan;  de Azevedo Santiago, Andre L. C. M.;  Bezerra, Jadson Diogo Pereira;  Dima, Balint;  Acharya, Krishnendu;  Alvarez-Manjarrez, Julieta;  Bahkali, Ali H.;  Bhatt, Vinod K.;  Brandrud, Tor Erik;  Bulgakov, Timur S.;  Camporesi, E.;  Cao, Ting;  Chen, Yu-Xi;  Chen, Yuan-Yuan;  Devadatha, Bandarupalli;  Elgorban, Abdallah M.;  Fan, Long-Fei;  Du, Xing;  Gao, Liu;  Goncalves, Camila Melo;  Gusmao, Luis F. P.;  Huanraluek, Naruemon;  Jadan, Margita;  Jayawardena, Ruvishika S.;  Khalid, Abdul Nasir;  Langer, Ewald;  Lima, Diogo X.;  de Lima-Junior, Nelson Correia;  de Lira, Carla Rejane Sousa;  Liu, Jian-Kui (Jack);  Liu, Shun;  Lumyong, Saisamorn;  Luo, Zong-Long;  Matocec, Neven;  Niranjan, M.;  Oliveira-Filho, Jose Ribamar Costa;  Papp, Viktor;  Perez-Pazos, Eduardo;  Phillips, Alan J. L.;  Qiu, Peng-Lei;  Ren, Yihua;  Ruiz, Rafael F. Castaneda;  Semwal, Kamal C.;  Soop, Karl;  de Souza, Carlos A. F.;  Souza-Motta, Cristina Maria;  Sun, Li-Hua;  Xie, Meng-Le;  Yao, Yi-Jian;  Zhao, Qi;  Zhou, Li-Wei
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The Chromosome-Level Reference Genome of Tea Tree Unveils Recent Bursts of Non-autonomous LTR Retrotransposons in Driving Genome Size Evolution 期刊论文
MOLECULAR PLANT, 2020
Authors:  Zhang, Qun-Jie;  Li, Wei;  Li, Kui;  Nan, Hong;  Shi, Cong;  Zhang, Yun;  Dai, Zhang-Yan;  Lin, Yang-Lei;  Yang, Xiao-Lan;  Tong, Yan;  Zhang, Dan;  Lu, Cui;  Feng, Li-Ying;  Wang, Chen-Feng;  Liu, Xiao-Xin;  Huang, Jian-An;  Jiang, Wen-Kai;  Wang, Xing-Hua;  Zhang, Xing-Cai;  Eichler, Evan E.;  Liu, Zhong-Hua;  Gao, Li-Zhi
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Taxonomy and phylogeny of hyaline-spored coelomycetes 期刊论文
FUNGAL DIVERSITY, 2020
Authors:  Li, Wen-Jing;  McKenzie, Eric H. C.;  Liu, Jian-Kui (Jack);  Bhat, D. Jayarama;  Dai, Dong-Qin;  Camporesi, Erio;  Tian, Qing;  Maharachchikumbura, Sajeewa S. N.;  Luo, Zong-Long;  Shang, Qiu-Ju;  Zhang, Jin-Feng;  Tangthirasunun, Narumon;  Karunarathna, Samantha C.;  Xu, Jian-Chu;  Hyde, Kevin D.
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