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The Global Soil Mycobiome consortium dataset for boosting fungal diversity research 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 111, 期号: 1, 页码: 573-588
Authors:  Tedersoo,Leho;  Mikryukov,Vladimir;  Anslan,Sten;  Bahram,Mohammad;  Khalid,Abdul Nasir;  Corrales,Adriana;  Agan,Ahto;  Vasco-Palacios,Aida-M;  Saitta,Alessandro;  Antonelli,Alexandre;  Rinaldi,Andrea C.;  Verbeken,Annemieke;  Sulistyo,Bobby P.;  Tamgnoue,Boris;  Furneaux,Brendan;  Ritter,Camila Duarte;  Nyamukondiwa,Casper;  Sharp,Cathy;  Marin,Cesar;  Dai,D. Q.;  Gohar,Daniyal;  Sharmah,Dipon;  Biersma,Elisabeth Machteld;  Cameron,Erin K.;  De Crop,Eske;  Otsing,Eveli;  Davydov,Evgeny A.;  Albornoz,Felipe E.;  Brearley,Francis Q.;  Buegger,Franz;  Gates,Genevieve;  Zahn,Geoffrey;  Bonito,Gregory;  Hiiesalu,Indrek;  Hiiesalu,Inga;  Zettur,Irma;  Barrio,Isabel C.;  Parn,Jaan;  Heilmann-Clausen,Jacob;  Ankuda,Jelena;  Kupagme,John Y.;  Sarapuu,Joosep;  Macia-Vicente,Jose G.;  Fovo,Joseph Djeugap;  Geml,Jozsef;  Alatalo,Juha M.;  Alvarez-Manjarrez,Julieta;  Monkai,Jutamart;  Poldmaa,Kadri;  Runnel,Kadri;  Adamson,Kalev;  Brathen,Kari A.;  Pritsch,Karin;  Tchan,Kassim,I;  Armolaitis,Kestutis;  Hyde,Kevin D.;  Newsham,Kevin K.;  Panksep,Kristel;  Adebola,Lateef A.;  Lamit,Louis J.;  Saba,Malka;  da Silva Caceres,Marcela E.;  Tuomi,Maria;  Gryzenhout,Marieka;  Bauters,Marijn;  Balint,Miklos;  Wijayawardene,Nalin;  Hagh-Doust,Niloufar;  Yorou,Nourou S.;  Kurina,Olavi;  Mortimer,Peter E.;  Meidl,Peter;  Nilsson,R. Henrik;  Puusepp,Rasmus;  Casique-Valdes,Rebeca;  Drenkhan,Rein;  Garibay-Orijel,Roberto;  Godoy,Roberto;  Alfarraj,Saleh;  Rahimlou,Saleh;  Polme,Sergei;  Dudov,Sergey,V;  Mundra,Sunil;  Ahmed,Talaat;  Netherway,Tarquin;  Henkel,Terry W.;  Roslin,Tomas;  Fedosov,Vladimir E.;  Onipchenko,Vladimir G.;  Yasanthika,W. A. Erandi;  Lim,Young Woon;  Piepenbring,Meike;  Klavina,Darta;  Koljalg,Urmas;  Abarenkov,Kessy
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Soil fungi  Global dataset  PacBio sequencing  Fungal richness  IDENTIFICATION  
Fungal taxonomy and sequence-based nomenclature 期刊论文
NATURE MICROBIOLOGY, 2021, 卷号: 6, 期号: 5, 页码: 540-548
Authors:  Lucking,Robert;  Aime,M. Catherine;  Robbertse,Barbara;  Miller,Andrew N.;  Aoki,Takayuki;  Ariyawansa,Hiran A.;  Cardinali,Gianluigi;  Crous,Pedro W.;  Druzhinina,Irina S.;  Geiser,David M.;  Hawksworth,David L.;  Hyde,Kevin D.;  Irinyi,Laszlo;  Jeewon,Rajesh;  Johnston,Peter R.;  Kirk,Paul M.;  Malosso,Elaine;  May,Tom W.;  Meyer,Wieland;  Nilsson,Henrik R.;  Opik,Maarja;  Robert,Vincent;  Stadler,Marc;  Thines,Marco;  Vu,Duong;  Yurkov,Andrey M.;  Zhang,Ning;  Schoch,Conrad L.
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DIVERSITY  GEN.  NOV.  TREE  
FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles (vol 105, 116, 2020) 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 107, 期号: 1, 页码: 129-132
Authors:  Polme,Sergei;  Abarenkov,Kessy;  Henrik Nilsson,R.;  Lindahl,Bjorn D.;  Clemmensen,Karina Engelbrecht;  Kauserud,Havard;  Nguyen,Nhu;  Kjoller,Rasmus;  Bates,Scott T.;  Baldrian,Petr;  Froslev,Tobias Guldberg;  Adojaan,Kristjan;  Vizzini,Alfredo;  Suija,Ave;  Pfister,Donald;  Baral,Hans-Otto;  Jarv,Helle;  Madrid,Hugo;  Norden,Jenni;  Liu,Jian-Kui;  Pawlowska,Julia;  Poldmaa,Kadri;  Partel,Kadri;  Runnel,Kadri;  Hansen,Karen;  Larsson,Karl-Henrik;  Hyde,Kevin David;  Sandoval-Denis,Marcelo;  Smith,Matthew E.;  Toome-Heller,Merje;  Wijayawardene,Nalin N.;  Menolli,Nelson,Jr.;  Reynolds,Nicole K.;  Drenkhan,Rein;  Maharachchikumbura,Sajeewa S. N.;  Gibertoni,Tatiana B.;  Laessoe,Thomas;  Davis,William;  Tokarev,Yuri;  Corrales,Adriana;  Soares,Adriene Mayra;  Agan,Ahto;  Machado,Alexandre Reis;  Arguelles-Moyao,Andres;  Detheridge,Andrew;  de Meiras-Ottoni,Angelina;  Verbeken,Annemieke;  Dutta,Arun Kumar;  Cui,Bao-Kai;  Pradeep,C. K.;  Marin,Cesar;  Stanton,Daniel;  Gohar,Daniyal;  Wanasinghe,Dhanushka N.;  Otsing,Eveli;  Aslani,Farzad;  Griffith,Gareth W.;  Lumbsch,Thorsten H.;  Grossart,Hans-Peter;  Masigol,Hossein;  Timling,Ina;  Hiiesalu,Inga;  Oja,Jane;  Kupagme,John Y.;  Geml,Jozsef;  Alvarez-Manjarrez,Julieta;  Ilves,Kai;  Loit,Kaire;  Adamson,Kalev;  Nara,Kazuhide;  Kungas,Kati;  Rojas-Jimenez,Keilor;  Bitenieks,Kriss;  Irinyi,Laszlo;  Nagy,Laszlo G.;  Soonvald,Liina;  Zhou,Li-Wei;  Wagner,Lysett;  Aime,M. Catherine;  Opik,Maarja;  Mujica,Maria Isabel;  Metsoja,Martin;  Ryberg,Martin;  Vasar,Martti;  Murata,Masao;  Nelsen,Matthew P.;  Cleary,Michelle;  Samarakoon,Milan C.;  Doilom,Mingkwan;  Bahram,Mohammad;  Hagh-Doust,Niloufar;  Dulya,Olesya;  Johnston,Peter;  Kohout,Petr;  Chen,Qian;  Tian,Qing;  Nandi,Rajasree;  Amiri,Rasekh;  Perera,Rekhani Hansika;  dos Santos Chikowski,Renata;  Mendes-Alvarenga,Renato L.;  Garibay-Orijel,Roberto;  Gielen,Robin;  Phookamsak,Rungtiwa;  Jayawardena,Ruvishika S.;  Rahimlou,Saleh;  Karunarathna,Samantha C.;  Tibpromma,Saowaluck;  Brown,Shawn P.;  Sepp,Siim-Kaarel;  Mundra,Sunil;  Luo,Zhu-Hua;  Bose,Tanay;  Vahter,Tanel;  Netherway,Tarquin;  Yang,Teng;  May,Tom;  Varga,Torda;  Li,Wei;  Coimbra,Victor Rafael Matos;  de Oliveira,Virton Rodrigo Targino;  de Lima,Vitor Xavier;  Mikryukov,Vladimir S.;  Lu,Yongzhong;  Matsuda,Yosuke;  Miyamoto,Yumiko;  Koljalg,Urmas;  Tedersoo,Leho
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FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles 期刊论文
FUNGAL DIVERSITY, 2020, 卷号: 105, 期号: 1, 页码: 1-16
Authors:  Polme,Sergei;  Abarenkov,Kessy;  Henrik Nilsson,R.;  Lindahl,Bjorn D.;  Clemmensen,Karina Engelbrecht;  Kauserud,Havard;  Nguyen,Nhu;  Kjoller,Rasmus;  Bates,Scott T.;  Baldrian,Petr;  Froslev,Tobias Guldberg;  Adojaan,Kristjan;  Vizzini,Alfredo;  Suija,Ave;  Pfister,Donald;  Baral,Hans-Otto;  Jarv,Helle;  Madrid,Hugo;  Norden,Jenni;  Liu,Jian-Kui;  Pawlowska,Julia;  Poldmaa,Kadri;  Partel,Kadri;  Runnel,Kadri;  Hansen,Karen;  Larsson,Karl-Henrik;  Hyde,Kevin David;  Sandoval-Denis,Marcelo;  Smith,Matthew E.;  Toome-Heller,Merje;  Wijayawardene,Nalin N.;  Menolli,Nelson,Jr.;  Reynolds,Nicole K.;  Drenkhan,Rein;  Maharachchikumbura,Sajeewa S. N.;  Gibertoni,Tatiana B.;  Laessoe,Thomas;  Davis,William;  Tokarev,Yuri;  Corrales,Adriana;  Soares,Adriene Mayra;  Agan,Ahto;  Machado,Alexandre Reis;  Arguelles-Moyao,Andres;  Detheridge,Andrew;  de Meiras-Ottoni,Angelina;  Verbeken,Annemieke;  Dutta,Arun Kumar;  Cui,Bao-Kai;  Pradeep,C. K.;  Marin,Cesar;  Stanton,Daniel;  Gohar,Daniyal;  Wanasinghe,Dhanushka N.;  Otsing,Eveli;  Aslani,Farzad;  Griffith,Gareth W.;  Lumbsch,Thorsten H.;  Grossart,Hans-Peter;  Masigol,Hossein;  Timling,Ina;  Hiiesalu,Inga;  Oja,Jane;  Kupagme,John Y.;  Geml,Jozsef;  Alvarez-Manjarrez,Julieta;  Ilves,Kai;  Loit,Kaire;  Adamson,Kalev;  Nara,Kazuhide;  Kungas,Kati;  Rojas-Jimenez,Keilor;  Bitenieks,Kriss;  Irinyi,Laszlo;  Nagy,Laszlo Laszlo;  Soonvald,Liina;  Zhou,Li-Wei;  Wagner,Lysett;  Aime,M. Catherine;  opik,Maarja;  Mujica,Maria Isabel;  Metsoja,Martin;  Ryberg,Martin;  Vasar,Martti;  Murata,Masao;  Nelsen,Matthew P.;  Cleary,Michelle;  Samarakoon,Milan C.;  Doilom,Mingkwan;  Bahram,Mohammad;  Hagh-Doust,Niloufar;  Dulya,Olesya;  Johnston,Peter;  Kohout,Petr;  Chen,Qian;  Tian,Qing;  Nandi,Rajasree;  Amiri,Rasekh;  Perera,Rekhani Hansika;  dos Santos Chikowski,Renata;  Mendes-Alvarenga,Renato L.;  Garibay-Orijel,Roberto;  Gielen,Robin;  Phookamsak,Rungtiwa;  Jayawardena,Ruvishika S.;  Rahimlou,Saleh;  Karunarathna,Samantha C.;  Tibpromma,Saowaluck;  Brown,Shawn P.;  Sepp,Siim-Kaarel;  Mundra,Sunil;  Luo,Zhu-Hua;  Bose,Tanay;  Vahter,Tanel;  Netherway,Tarquin;  Yang,Teng;  May,Tom;  Varga,Torda;  Li,Wei;  Coimbra,Victor Rafael Matos;  de Oliveira,Virton Rodrigo Targino;  de Lima,Vitor Xavier;  Mikryukov,Vladimir S.;  Lu,Yongzhong;  Matsuda,Yosuke;  Miyamoto,Yumiko;  Koljalg,Urmas;  Tedersoo,Leho
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Fungal traits  Trophic modes  Function  Guild  Bioinformatics  High-throughput sequencing  Community ecology  PLANT  IDENTIFICATION  ENDOPHYTES  ECOLOGY  BIODIVERSITY  RECOGNITION  EVOLUTION  LINEAGES  PARADIGM  DECAY  
Mycobiomes of sympatric Amorphophallus albispathus (Araceae) and Camellia sinensis (Theaceae) - a case study reveals clear tissue preferences and differences in diversity and composition 期刊论文
MYCOLOGICAL PROGRESS, 2018, 卷号: 17, 期号: 4, 页码: 489-500
Authors:  Unterseher, Martin;  Karunarathna, Samantha C.;  Cruz, Garcia Roberto;  Dagamac, Nikki H.;  Dahl, Mathilde B.;  Dool, Serena E.;  Galla, Michelle;  Herbst, Lina;  Nilsson, R. Henrik;  Puechmaille, Sebastien J.;  Schoener, Caroline;  Schoener, Michael;  Siddique, Abu B.;  Teltewskoi, Annette;  Wicke, Kristina;  Wuerth, David G.;  Wurzbacher, Christian;  Hyde, Kevin D.
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Camellia  Mycobiome Diversity  High-throughput Metabarcoding  Host Specialization  Tissue Preferences Of Endophytes  
One stop shop: backbones trees for important phytopathogenic genera: I (2014) 期刊论文
FUNGAL DIVERSITY, 2014, 卷号: 67, 期号: 1, 页码: 21-125
Authors:  Hyde, Kevin D.;  Nilsson, R. Henrik;  Alias, S. Aisyah;  Ariyawansa, Hiran A.;  Blair, Jaime E.;  Cai, Lei;  de Cock, Arthur W. A. M.;  Dissanayake, Asha J.;  Glockling, Sally L.;  Goonasekara, Ishani D.;  Gorczak, Michal;  Hahn, Matthias;  Jayawardena, Ruvishika S.;  van Kan, Jan A. L.;  Laurence, Matthew H.;  Levesque, C. Andre;  Li, Xinghong;  Liu, Jian-Kui;  Maharachchikumbura, Sajeewa S. N.;  Manamgoda, Dimuthu S.;  Martin, Frank N.;  McKenzie, Eric H. C.;  McTaggart, Alistair R.;  Mortimer, Peter E.;  Nair, Prakash V. R.;  Pawlowska, Julia;  Rintoul, Tara L.;  Shivas, Roger G.;  Spies, Christoffel F. J.;  Summerell, Brett A.;  Taylor, Paul W. J.;  Terhem, Razak B.;  Udayanga, Dhanushka;  Vaghefi, Niloofar;  Walther, Grit;  Wilk, Mateusz;  Wrzosek, Marta;  Xu, Jian-Chu;  Yan, JiYe;  Zhou, Nan;  Hyde,KD (reprint author),Chinese Acad Sci,Kunming Inst Bot,Key Lab Plant Divers & Biogeog East Asia,Kunming 650201,Peoples R China.;  kdhyde3@gmail.com
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Ascomycota  Basidiomycota  Endophytes  Mucormycotina  Molecular Identification  Oomycota  Plant Pathogens  Protozoa  
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi 期刊论文
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2014, 页码: bau061
Authors:  Schoch, Conrad L.;  Robbertse, Barbara;  Robert, Vincent;  Duong Vu;  Cardinali, Gianluigi;  Irinyi, Laszlo;  Meyer, Wieland;  Nilsson, R. Henrik;  Hughes, Karen;  Miller, Andrew N.;  Kirk, Paul M.;  Abarenkov, Kessy;  Aime, M. Catherine;  Ariyawansa, Hiran A.;  Bidartondo, Martin;  Boekhout, Teun;  Buyck, Bart;  Cai, Qing;  Chen, Jie;  Crespo, Ana;  Crous, Pedro W.;  Damm, Ulrike;  De Beer, Z. Wilhelm;  Dentinger, Bryn T. M.;  Divakar, Pradeep K.;  Duenas, Margarita;  Feau, Nicolas;  Fliegerova, Katerina;  Garcia, Miguel A.;  Ge, Zai-Wei;  Griffith, GarethW.;  Groenewald, Johannes Z.;  Groenewald, Marizeth;  Grube, Martin;  Gryzenhout, Marieka;  Gueidan, Cecile;  Guo, Liangdong;  Hambleton, Sarah;  Hamelin, Richard;  Hansen, Karen;  Hofstetter, Valerie;  Hong, Seung-Beom;  Houbraken, Jos;  Hyde, Kevin D.;  Inderbitzin, Patrik;  Johnston, Peter R.;  Karunarathna, Samantha C.;  Koljalg, Urmas;  Kovacs, Gabor M.;  Kraichak, Ekaphan;  Krizsan, Krisztina;  Kurtzman, Cletus P.;  Larsson, Karl-Henrik;  Leavitt, Steven;  Letcher, Peter M.;  Liimatainen, Kare;  Liu, Jian-Kui;  Lodge, D. Jean;  Luangsa-ard, Janet Jennifer;  Lumbsch, H. Thorsten;  Maharachchikumbura, Sajeewa S. N.;  Manamgoda, Dimuthu;  Martin, Maria P.;  Minnis, Andrew M.;  Moncalvo, Jean-Marc;  Mule, Giuseppina;  Nakasone, Karen K.;  Niskanen, Tuula;  Olariaga, Ibai;  Papp, Tamas;  Petkovits, Tamas;  Pino-Bodas, Raquel;  Powell, Martha J.;  Raja, Huzefa A.;  Redecker, Dirk;  Sarmiento-Ramirez, J. M.;  Seifert, Keith A.;  Shrestha, Bhushan;  Stenroos, Soili;  Stielow, Benjamin;  Suh, Sung-Oui;  Tanaka, Kazuaki;  Tedersoo, Leho;  Teresa Telleria, M.;  Udayanga, Dhanushka;  Untereiner, Wendy A.;  Dieguez Uribeondo, Javier;  Subbarao, Krishna V.;  Vagvoelgyi, Csaba;  Visagie, Cobus;  Voigt, Kerstin;  Walker, Donald M.;  Weir, Bevan S.;  Weiss, Michael;  Wijayawardene, Nalin N.;  Wingfield, Michael J.;  Xu, J. P.;  Yang, Zhu L.;  Zhang, Ning;  Zhuang, Wen-Ying;  Federhen, Scott;  Yang, YP (reprint author), Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Menglun Township 650201, Yunnan, Peoples R China.;  yangyp@mail.kib.ac.cn
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Internal Transcribed Spacer  Arbuscular Mycorrhizal Fungi  Ribosomal Dna  Interspecific Hybridization  Sequence Analyses  Species Complex  Identification  Evolution  Barcode  Life  
Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2007, 卷号: 43, 期号: 2, 页码: 430-451
Authors:  Matheny, P. Brandon;  Wang, Zheng;  Binder, Manfred;  Curtis, Judd M.;  Lim, Young Woon;  Nilsson, R. Henrik;  Hughes, Karen W.;  Hofstetter, Valerie;  Ammirati, Joseph F.;  Schoch, Conrad L.;  Langer, Ewald;  Langer, Gitta;  McLaughlin, David J.;  Wilson, Andrew W.;  Froslev, Tobias;  Ge, Zai-Wei;  Kerrigan, Richard W.;  Slot, Jason C.;  Yang, Zhu-Liang;  Baroni, Timothy J.;  Fischer, Michael;  Hosaka, Kentaro;  Matsuura, Kenji;  Seidl, Michelle T.;  Vauras, Jukka;  Hibbett, David S.
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Basidiomycota  Ef1-alpha  Fungi  Introns  Rna Polymerase Ii  Systematics