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A six-gene phylogenetic overview of Basidiomycota and allied phyla with estimated divergence times of higher taxa and a phyloproteomics perspective 期刊论文
FUNGAL DIVERSITY, 2017, 卷号: 84, 页码: 43-74
Authors:  Zhao, Rui-Lin;  Li, Guo-Jie;  Sanchez-Ramirez, Santiago;  Stata, Matt;  Yang, Zhu-Liang;  Wu, Gang;  Dai, Yu-Cheng;  He, Shuang-Hui;  Cui, Bao-Kai;  Zhou, Jun-Liang;  Wu, Fang;  He, Mao-Qiang;  Moncalvo, Jean-Marc;  Hyde, Kevin D.
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Fungi  Systematics  Taxonomy  Wallemiomycotina  
Towards standardizing taxonomic ranks using divergence times - a case study for reconstruction of the Agaricus taxonomic system 期刊论文
FUNGAL DIVERSITY, 2016, 卷号: 78, 期号: 1, 页码: 239-292
Authors:  Zhao, Rui-Lin;  Zhou, Jun-Liang;  Chen, Jie;  Margaritescu, Simona;  Sanchez-Ramirez, Santiago;  Hyde, Kevin D.;  Callac, Philippe;  Parra, Luis A.;  Li, Guo-Jie;  Moncalvo, Jean-Marc
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Agaricaceae  Divergence Times  Multi-gene Phylogenetics  Systematics  Taxonomy  
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi 期刊论文
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2014, 页码: bau061
Authors:  Schoch, Conrad L.;  Robbertse, Barbara;  Robert, Vincent;  Duong Vu;  Cardinali, Gianluigi;  Irinyi, Laszlo;  Meyer, Wieland;  Nilsson, R. Henrik;  Hughes, Karen;  Miller, Andrew N.;  Kirk, Paul M.;  Abarenkov, Kessy;  Aime, M. Catherine;  Ariyawansa, Hiran A.;  Bidartondo, Martin;  Boekhout, Teun;  Buyck, Bart;  Cai, Qing;  Chen, Jie;  Crespo, Ana;  Crous, Pedro W.;  Damm, Ulrike;  De Beer, Z. Wilhelm;  Dentinger, Bryn T. M.;  Divakar, Pradeep K.;  Duenas, Margarita;  Feau, Nicolas;  Fliegerova, Katerina;  Garcia, Miguel A.;  Ge, Zai-Wei;  Griffith, GarethW.;  Groenewald, Johannes Z.;  Groenewald, Marizeth;  Grube, Martin;  Gryzenhout, Marieka;  Gueidan, Cecile;  Guo, Liangdong;  Hambleton, Sarah;  Hamelin, Richard;  Hansen, Karen;  Hofstetter, Valerie;  Hong, Seung-Beom;  Houbraken, Jos;  Hyde, Kevin D.;  Inderbitzin, Patrik;  Johnston, Peter R.;  Karunarathna, Samantha C.;  Koljalg, Urmas;  Kovacs, Gabor M.;  Kraichak, Ekaphan;  Krizsan, Krisztina;  Kurtzman, Cletus P.;  Larsson, Karl-Henrik;  Leavitt, Steven;  Letcher, Peter M.;  Liimatainen, Kare;  Liu, Jian-Kui;  Lodge, D. Jean;  Luangsa-ard, Janet Jennifer;  Lumbsch, H. Thorsten;  Maharachchikumbura, Sajeewa S. N.;  Manamgoda, Dimuthu;  Martin, Maria P.;  Minnis, Andrew M.;  Moncalvo, Jean-Marc;  Mule, Giuseppina;  Nakasone, Karen K.;  Niskanen, Tuula;  Olariaga, Ibai;  Papp, Tamas;  Petkovits, Tamas;  Pino-Bodas, Raquel;  Powell, Martha J.;  Raja, Huzefa A.;  Redecker, Dirk;  Sarmiento-Ramirez, J. M.;  Seifert, Keith A.;  Shrestha, Bhushan;  Stenroos, Soili;  Stielow, Benjamin;  Suh, Sung-Oui;  Tanaka, Kazuaki;  Tedersoo, Leho;  Teresa Telleria, M.;  Udayanga, Dhanushka;  Untereiner, Wendy A.;  Dieguez Uribeondo, Javier;  Subbarao, Krishna V.;  Vagvoelgyi, Csaba;  Visagie, Cobus;  Voigt, Kerstin;  Walker, Donald M.;  Weir, Bevan S.;  Weiss, Michael;  Wijayawardene, Nalin N.;  Wingfield, Michael J.;  Xu, J. P.;  Yang, Zhu L.;  Zhang, Ning;  Zhuang, Wen-Ying;  Federhen, Scott;  Yang, YP (reprint author), Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Menglun Township 650201, Yunnan, Peoples R China.;  yangyp@mail.kib.ac.cn
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Internal Transcribed Spacer  Arbuscular Mycorrhizal Fungi  Ribosomal Dna  Interspecific Hybridization  Sequence Analyses  Species Complex  Identification  Evolution  Barcode  Life  
How well do ITS rDNA sequences differentiate species of true morels (Morchella)? 期刊论文
MYCOLOGIA, 2012, 卷号: 104, 期号: 6, 页码: 1351-1368
Authors:  Du, Xi-Hui;  Zhao, Qi;  Yang, Zhu L.;  Hansen, Karen;  Taskin, Hatira;  Buyukalaca, Saadet;  Dewsbury, Damon;  Moncalvo, Jean-Marc;  Douhan, Greg W.;  Robert, Vincent A. R. G.;  Crous, Pedro W.;  Rehner, Stephen A.;  Rooney, Alejandro P.;  Sink, Stacy;  O'Donnell, Kerry
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Ascomycota  Biodiversity  Biogeography  Emerencia  Gcpsr  Genbank  Phylogeny  Species Limits  
Major clades of Agaricales: a multilocus phylogenetic overview 期刊论文
MYCOLOGIA, 2006, 卷号: 98, 期号: 6, 页码: 982-995
Authors:  Matheny, P. Brandon;  Curtis, Judd M.;  Hofstetter, Valerie;  Aime, M. Catherine;  Moncalvo, Jean-Marc;  Ge, Zai-Wei;  Yang, Zhu-Liang;  Slot, Jason C.;  Ammirati, Joseph F.;  Baroni, Timothy J.;  Bougher, Neale L.;  Hughes, Karen W.;  Lodge, D. Jean;  Kerrigan, Richard W.;  Seidl, Michelle T.;  Aanen, Duur K.;  DeNitis, Matthew;  Daniele, Graciela M.;  Desjardin, Dennis E.;  Kropp, Bradley R.;  Norvell, Lorelei L.;  Parker, Andrew;  Vellinga, Else C.;  Vilgalys, Rytas;  Hibbett, David S.
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Basidiomycota  Fungi  Phylogeny  Mycorrhiza  Systernatics  Rbb1  Rpb2  
One hundred and seventeen clades of euagarics 期刊论文
Molecular Phylogenetics and Evolution, 2003, 卷号: 23, 页码: 357–400
Authors:  Jean-Marc Moncalvo;  Rytas Vilgalys;  Scott A. Redhead;  James E. Johnson;  Timothy Y. James;  M. Catherine Aime;  Valerie Hofstetter;  Sebastiaan J.W. Verduin;  Ellen Larsson;  Timothy J. Baroni;  R. Greg Thorn;  Stig Jacobsson;  Heinz Cl emenc on;  Orson K. Miller Jr.
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