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Genome skimming as an efficient tool for authenticating commercial products of the pharmaceutically important Paris yunnanensis (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 344
Authors:  Zhou,Nian;  Tang,Lilei;  Xie,Pingxuan;  Miao,Ke;  Yang,Chengjin;  Liu,Haiyang;  Ji,Yunheng
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Plastome  Rhizoma Paridis  Ribosomal DNA  Species identification  DNA BARCODE  IQ-TREE  CONSERVATION  IDENTIFICATION  OPPORTUNITIES  RENAISSANCE  CULTIVATION  PERFORMANCE  LIBRARY  FOREST  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
Authors:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
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East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Comparative analysis of the medicinal plant Polygonatum kingianum (Asparagaceae) with related verticillate leaf types of the Polygonatum species based on chloroplast genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1202634
Authors:  Shi,Naixing;  Yang,Zefen;  Miao,Ke;  Tang,Lilei;  Zhou,Nian;  Xie,Pingxuan;  Wen,Guosong
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Polygonatum  verticillate leaf  Polygonatum kingianum  chloroplast genome  comparative analysis  phylogenetic analysis  CODON USAGE  GENUS POLYGONATUM  SOFTWARE  TRANSFERABILITY  MITOCHONDRIAL  MARKERS  MODEL  
Phylogenetic Relationships and Next-Generation Barcodes in the Genus Torreya Reveal a High Proportion of Misidentified Cultivated Plants 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 卷号: 24, 期号: 17, 页码: 13216
Authors:  Mo,Zhi-Qiong;  Wang,Jie;  Moller,Michael;  Yang,Jun-Bo;  Gao,Lian-Ming
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Torreya  genome skimming  species identification  phylogeny  COMPLETE CHLOROPLAST GENOME  SEQUENCE  TAXACEAE  CEPHALOTAXACEAE  DIVERSIFICATION  PHYLOGENOMICS  INFERENCE  ALIGNMENT  ZHEJIANG  ACCURATE  
Plastome phylogenomics and morphological traits analyses provide new insights into the phylogenetic position, species delimitation and speciation of Triplostegia (Caprifoliaceae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 645
Authors:  Fu,Qing-Li;  Mo,Zhi-Qiong;  Xiang,Xiao-Guo;  Milne,Richard I.;  Jacquemyn,Hans;  Burgess,Kevin S.;  Sun,Ya-Nan;  Yan,Hua;  Qiu,Li;  Yang,Bo-Yun;  Tan,Shao-Lin
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Plastid genome  Phylogenomics  Speciation  Species delimitation  Triplostegia  FOREST DYNAMICS PLOT  HENGDUAN MOUNTAINS  ELEVATIONAL GRADIENT  SYSTEMATIC POSITION  RIVERINE BARRIER  DNA BARCODES  PLANT  DIPSACALES  SEQUENCE  DIVERSITY  
箭竹属的 DNA 条形码研究 学位论文
: 中国科学院大学, 2022
Authors:  吕时雨
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箭竹属, 浅层测序, DNA条形码, 叶绿体基因组, 核糖体DNA  Fargesia, genome-skimming, DNA barcoding, plastome, ribosomal DNA  
广义红豆杉科系统发育基因组学与生物地理学研究 学位论文
: 中国科学院大学, 2022
Authors:  汪洁
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广义红豆杉科,叶绿体基因组,二代条形码,系统发育基因组学,生物地理  Taxaceae s.l., Plastomes, Super-barcoding, Phylogenomics, Biogeography  
荨麻族的分子系统发育、叶绿体基因组演化及其大蝎子草属 的物种界定研究 学位论文
: 中国科学院大学, 2022
Authors:  CATHERINE AKINYI OGOMA
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荨麻族,叶绿体结构进化,系统发育基因组学,基因组浅层测序,大蝎子草属, 物种界定,荨麻科  Urticeae, plastome structural evolution, phylogenomic, genome skimming, Girardinia, automated species delimitation, molecular taxonomy, Urticaceae.  
A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya, from Oceania 期刊论文
TAXON, 2022, 卷号: 71, 期号: 1, 页码: 25-51
Authors:  Chen,De-Kui;  Zhou,Xin-Mao;  Rothfels,Carl J.;  Shepherd,Lara D.;  Knapp,Ralf;  Zhang,Liang;  Lu,Ngan Thi;  Fan,Xue-Ping;  Wan,Xia;  Gao,Xin-Fen;  He,Hai;  Zhang,Li-Bing
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Huperzia  Lycophyte Phylogeny  Lycopodiella Serpentina  Phlegmariurus  Phylloglossum  Vascular Plant Evolution  Complete Chloroplast Genome  Lycopodiopsida Lycopodiaceae  Generic Classification  Spore Morphology  Early Evolution  Land Plants  Rbcl Gene  Huperzia  Sequence  Likelihood  
Do taxon-specific DNA barcodes improve species discrimination relative to universal barcodes in Lauraceae? 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2022, 卷号: 199, 期号: 4, 页码: 741-753
Authors:  Liu, Zhi-Fang;  Ma, Hui;  Zhang, Xiao-Yan;  Ci, Xiu-Qin;  Li, Lang;  Hu, Jian-Lin;  Zhang, Can-Yu;  Xiao, Jian-Hua;  Li, His-Wen;  Conran, John G.;  Twyford, Alex D.;  Hollingsworth, Peter M.;  Li, Jie
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DNA barcoding  ITS  phylogenetics  plastid DNA  specific barcode design  CHLOROPLAST GENOME  LAND PLANTS  GENE  WOOD  PHYLOGENY  FAGACEAE  FAILURE