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Testing genome skimming for species discrimination in the large and taxonomically difficult genus Rhododendron 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2022, 卷号: 22, 期号: 1, 页码: 404-414
Authors:  Fu,Chao-Nan;  Mo,Zhi-Qiong;  Yang,Jun-Bo;  Cai,Jie;  Ye,Lin-Jiang;  Zou,Jia-Yun;  Qin,Han-Tao;  Zheng,Wei;  Hollingsworth,Peter M.;  Li,De-Zhu;  Gao,Lian-Ming
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Himalaya-Hengduan Mountains  infrageneric phylogenetic resolution  next generation DNA barcoding  Rhododendron  species discrimination  PHYLOGENETIC-RELATIONSHIPS  SECTIONAL RELATIONSHIPS  CHLOROPLAST GENOME  DNA BARCODES  ERICACEAE  HYBRIDIZATION  YUNNAN  DIVERSITY  PATTERNS  AGASTUM  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
Authors:  Gregory W. Stull
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Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1183-1197
Authors:  Ye,Xia-Ying;  Ma,Peng-Fei;  Guo,Cen;  Li,De-Zhu
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plastome  ddRAD  Fargesia  phylogenetic incongruence  reticulate evolution  Yushania  CONFLICTING GENE TREES  BAMBOOS POACEAE  ARUNDINARIEAE POACEAE  PHYLOGENETIC-RELATIONSHIPS  MORPHOLOGICAL EVOLUTION  BALANCING SELECTION  THAMNOCALAMUS GROUP  ALLIES GRAMINEAE  RADSEQ DATA  GBSSI GENE  
Deciphering the Taxonomic Delimitation of Ottelia acuminata (Hydrocharitaceae) Using Complete Plastomes as Super-Barcodes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 681270
Authors:  Ji,Yunheng;  Yang,Jin;  Landis,Jacob B.;  Wang,Shuying;  Yang,Zhenyan;  Zhang,Yonghong
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species boundary  molecular identification  DNA barcoding  taxonomy  threatened species  aquatic plant  SPECIES DELIMITATION  DNA BARCODES  MACROPHYTE DECLINE  CONSERVATION  GENOMES  BIODIVERSITY  GENETICS  MODEL  LAKES  SPP.  
Plastome phylogenomics of the East Asian endemic genus Dobinea 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 35-42
Authors:  Liu,Changkun;  Yang,Jin;  Jin,Lei;  Wang,Shuying;  Yang,Zhenyan;  Ji,Yunheng
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Neo-endemism  Divergence  Dobinea delavayi  Dobinea vulgaris  Dobineeae  Anacardiaceae  QUANTITATIVE RECONSTRUCTION  MOLECULAR PHYLOGENETICS  EVOLUTIONARY HISTORY  CHLOROPLAST GENOME  SAPINDALES  MONSOON  NUCLEAR  CHINA  DIVERSIFICATION  ANACARDIACEAE  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
Authors:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
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SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Smelowskia sunhangii (Brassicaceae), a new species from China, with a re-evaluation of the S. tibetica complex 期刊论文
PHYTOKEYS, 2021, 期号: 178, 页码: 179-191
Authors:  Zhang,Xin-jian;  Chen,Jun-Tong;  Al-Shehbaz,Ihsan A.;  Liu,Qun;  Li,Li-Juan;  Liu,Peng-Ju;  Huang,Xian-Han;  Deng,Tao
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Brassicaceae  China  Cruciferae  new species  phylogeny  taxonomy  SYNOPSIS  DNA  
Natural hybridization among three Rhododendron species (Ericaceae) revealed by morphological and genomic evidence 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 529
Authors:  Zheng,Wei;  Yan,Li-Jun;  Burgess,Kevin S.;  Luo,Ya-Huang;  Zou,Jia-Yun;  Qin,Han-Tao;  Wang,Ji-Hua;  Gao,Lian-Ming
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ddRAD sequencing  Hybrid zone  Morphological trait  Genetic structure  Natural hybridization  Rhododendron  SAGEBRUSH ARTEMISIA-TRIDENTATA  NARROW HYBRID ZONE  ASYMMETRIC HYBRIDIZATION  REPRODUCTIVE ISOLATION  AQUILEGIA-FORMOSA  PINUS-DENSATA  MOUNT-ETNA  SPECIATION  ORIGIN  ADAPTATION  
Plastome phylogenomics of Cephalotaxus (Cephalotaxaceae) and allied genera 期刊论文
ANNALS OF BOTANY, 2021, 卷号: 127, 期号: 5, 页码: 697-708
Authors:  Ji,Yunheng;  Liu,Changkun;  Landis,Jacob B.;  Deng,Min;  Chen,Jiahui
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Gymnosperm  Cephalotaxaceae  Taxaceae  phylogeny  molecular dating  taxonomic delineation  recent speciation  QUANTITATIVE RECONSTRUCTION  PHYLOGENETIC-RELATIONSHIPS  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  SOUTHWEST CHINA  TAXACEAE  FLORA  CHLOROPLAST  SEQUENCE  CLIMATE  
Highly degenerate plastomes in two hemiparasitic dwarf mistletoes: Arceuthobium chinense and A. pini (Viscaceae) 期刊论文
PLANTA, 2021, 卷号: 253, 期号: 6, 页码: 125
Authors:  Guo,Xiaorong;  Zhang,Guangfei;  Fan,Linyuan;  Liu,Changkun;  Ji,Yunheng
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Endophytic habit  Reductive evolution  Rpo genes  rpl33  Gene loss  Santalales  COMPLETE CHLOROPLAST GENOME  PLASTID GENOME  NDH GENES  PHYSIOLOGICAL-ASPECTS  EVOLUTIONARY RATE  DNA BARCODE  LIFE-STYLE  SEQUENCE  ORGANIZATION  LORANTHACEAE