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Characteristics of plastid genomes in the genus Ceratostigma inhabiting arid habitats in China and their phylogenomic implications 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 303
Authors:  Zhao,Yu-Juan;  Liu,Jian;  Yin,Gen-Shen;  Gong,Xun
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Ceratostigma  Plastid genome  Comparative analysis  Interspecific relationship  Plumbaginaceae  COMPLETE CHLOROPLAST GENOME  MEKONG-SALWEEN DIVIDE  LIMONIUM-SINENSE  INVERTED REPEAT  SEQUENCE  EVOLUTION  DNA  PLUMBAGINACEAE  CONSEQUENCES  DIVERSITY  
Comparative Analysis and Characterization of Ten Complete Chloroplast Genomes of Eremurus Species (Asphodelaceae) 期刊论文
FORESTS, 2023, 卷号: 14, 期号: 9, 页码: 1709
Authors:  Makhmudjanov,Dilmurod;  Abdullaev,Davlatali;  Juramurodov,Inom;  Tuychiev,Shakhzodbek;  Yusupov,Ziyoviddin;  Sun,Hang;  Tojibaev,Komiljon;  Deng,Tao
View  |  Adobe PDF(7461Kb)  |  Favorite  |  View/Download：118/18  |  Submit date：2024/05/09
Eremurus  chloroplast genome  codon usage  comparative analysis  phylogeny  protein-coding genes  MULTIPLE SEQUENCE ALIGNMENT  PHYLOGENETIC ANALYSIS  GENE-EXPRESSION  TRNL-F  SYSTEMATICS  EVOLUTION  INTRON  TOOL  
Comparative analysis of the medicinal plant Polygonatum kingianum (Asparagaceae) with related verticillate leaf types of the Polygonatum species based on chloroplast genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1202634
Authors:  Shi,Naixing;  Yang,Zefen;  Miao,Ke;  Tang,Lilei;  Zhou,Nian;  Xie,Pingxuan;  Wen,Guosong
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Polygonatum  verticillate leaf  Polygonatum kingianum  chloroplast genome  comparative analysis  phylogenetic analysis  CODON USAGE  GENUS POLYGONATUM  SOFTWARE  TRANSFERABILITY  MITOCHONDRIAL  MARKERS  MODEL  
Phylogenomic and comparative analyses of Coffeeae alliance (Rubiaceae): deep insights into phylogenetic relationships and plastome evolution 期刊论文
BMC PLANT BIOLOGY, 2022, 卷号: 22, 期号: 1, 页码: 88
Authors:  Amenu, Sara Getachew;  Wei, Neng;  Wu, Lei;  Oyebanji, Oyetola;  Hu, Guangwan;  Zhou, Yadong;  Wang, Qingfeng
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Coffeeae alliance  Phylogenomic  Plastome  Plastome structural variations (PSVs)  Rubiaceae  COMPLETE CHLOROPLAST GENOME  CODON USAGE BIAS  INVERTED REPEAT  SEQUENCE  ALIGNMENT  GENE  SUBFAMILIES  CONTRACTION  ANGIOSPERMS  EXPANSION  
Comparative Chloroplast Genome Analysis of Wax Gourd (Benincasa hispida) with Three Benincaseae Species, Revealing Evolutionary Dynamic Patterns and Phylogenetic Implications 期刊论文
GENES, 2022, 卷号: 13, 期号: 3, 页码: 461
Authors:  Song, Weicai;  Chen, Zimeng;  He, Li;  Feng, Qi;  Zhang, Hongrui;  Du, Guilin;  Shi, Chao;  Wang, Shuo
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Benincasa hispida  chloroplast genome  comparative analysis  divergence region  phylogenetic  CUCURBITACEAE  SEQUENCES  PLANTS  ANNOTATION  EXTRACT  FAMILY  FRUITS  GENES  TOOLS  
Comparative Analysis the Complete Chloroplast Genomes of Nine Musa Species: Genomic Features, Comparative Analysis, and Phylogenetic Implications 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 832884
Authors:  Song, Weicai;  Ji, Chuxuan;  Chen, Zimeng;  Cai, Haohong;  Wu, Xiaomeng;  Shi, Chao;  Wang, Shuo
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Musa  chloroplast genome  genetic structure  comparative analysis  phylogenetic analysis  interspecific relationships  BANANA  SEQUENCE  GENES  DNA  WASTE  ANGIOSPERMS  ANNOTATION  EVOLUTION  REMOVAL  PLANTS  
The complete mitochondrial genome of Ophiocordyceps gracilis and its comparison with related species 期刊论文
IMA FUNGUS, 2021, 卷号: 12, 期号: 1, 页码: 31
Authors:  Abuduaini,Aifeire;  Wang,Yuan-Bing;  Zhou,Hui-Ying;  Kang,Rui-Ping;  Ding,Ming-Liang;  Jiang,Yu;  Suo,Fei-Ya;  Huang,Luo-Dong
View  |  Adobe PDF(4435Kb)  |  Favorite  |  View/Download：258/40  |  Submit date：2022/04/02
Mitochondrial genome  Phylogenetic analysis  Ophiocordyceps gracilis  Ophiocordycipitaceae  GROUP-I  CATERPILLAR FUNGUS  AGARICUS-BISPORUS  SEQUENCE  EVOLUTION  HYPOCREALES  CORDYCEPS  REVEALS  OPHIOCORDYCIPITACEAE  VARIABILITY  
Phylogeny and evolution of chloroplast tRNAs in Adoxaceae 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 3, 页码: 1294-1309
Authors:  Zhong,Qiu-Yi;  Fu,Xiao-Gang;  Zhang,Ting-Ting;  Zhou,Tong;  Yue,Ming;  Liu,Jian-Ni;  Li,Zhong-Hu
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anticodon  chloroplast tRNA  intron  phylogeny  transition  transversion  NONOPTIMAL CODON USAGE  HORIZONTAL TRANSFER  GENE DUPLICATION  GENOME  MITOCHONDRIAL  ORIGIN  TRANSLATION  SEQUENCES  ACID  DNA  
The Genomic Selfing Syndrome Accompanies the Evolutionary Breakdown of Heterostyly 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 1, 页码: 168-180
Authors:  Wang,Xin-Jia;  Barrett,Spencer C. H.;  Zhong,Li;  Wu,Zhi-Kun;  Li,De-Zhu;  Wang,Hong;  Zhou,Wei
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deleterious mutations  effective population size  mating system  Primula  selection efficacy  ADAPTIVE MOLECULAR EVOLUTION  MATING SYSTEM  BREEDING SYSTEMS  DELETERIOUS MUTATIONS  PURIFYING SELECTION  POPULATION-SIZE  LINKAGE DISEQUILIBRIUM  INBREEDING DEPRESSION  PHYLOGENETIC ANALYSES  BACKGROUND SELECTION  
Plastid NDH Pseudogenization and Gene Loss in a Recently Derived Lineage from the Largest Hemiparasitic Plant Genus Pedicularis (Orobanchaceae ) 期刊论文
PLANT AND CELL PHYSIOLOGY, 2021, 卷号: 62, 期号: 6, 页码: 971-984
Authors:  Li,Xin;  Yang,Jun-Bo;  Wang,Hong;  Song,Yu;  Corlett,Richard T.;  Yao,Xin;  Li,De-Zhu;  Yu,Wen-Bin
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Hemiparasite  IR expansion  NA(D)H dehydrogenase-like complex  Orobanchaceae  Pseudogenization  Relaxation of selection  ACETYL-COA CARBOXYLASE  INVERTED REPEAT  LIFE-STYLE  ACCD GENE  EVOLUTION  GENOME  DIVERSITY  PHYLOGENY  SELECTION  INSIGHTS