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Draft genomes of two outcrossing wild rice,Oryza rufipogonandO. longistaminata, reveal genomic features associated with mating-system evolution 期刊论文
PLANT DIRECT, 2020, 卷号: 4, 期号: 6, 页码: 12
Authors:  Li, Wei;  Zhang, Qun-Jie;  Zhu, Ting;  Tong, Yan;  Li, Kui;  Shi, Cong;  Zhang, Yun;  Liu, Yun-Long;  Jiang, Jian-Jun;  Liu, Yuan;  Xia, En-Hua;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Dan;  Shi, Chao;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Jiao, Jun-ying;  Xu, Ping-Zhen;  Yang, Li-Li;  Gao, Li-Zhi
Favorite  |  View/Download：9/0  |  Submit date：2020/08/17
adaptation  genome and transcriptome assemblies  mating system evolution  O. longistaminata A. Chev. & Roehr.  Oryza rufipogon Griff  
The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
Favorite  |  View/Download：24/0  |  Submit date：2020/03/24
rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Evolution of Oryza chloroplast genomes promoted adaptation to diverse ecological habitats 期刊论文
COMMUNICATIONS BIOLOGY, 2019, 卷号: 2, 页码: UNSP 278
Authors:  Gao,Li-Zhi;  Liu,Yun-Long;  Zhang,Dan;  Li,Wei;  Gao,Ju;  Liu,Yuan;  Li,Kui;  Shi,Chao;  Zhao,Yuan;  Zhao,You-Jie;  Jiao,Jun-Ying;  Mao,Shu-Yan;  Gao,Cheng-Wen;  Eichler,Evan E.
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Chloroplast genome of tropical and sub-tropical fruit tree Clausena lansium (Rutaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 卷号: 3, 期号: 2, 页码: 519-520
Authors:  Niu, Ying-Feng;  Ni, Shu-Bang;  Liu, Zi-Yan;  Zheng, Cheng;  Mao, Chang-Li;  Shi, Chao;  Liu, Jin
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Clausena Lansium  Chloroplast Genome  Rutaceae  
The complete chloroplast genome of tropical and sub-tropical fruit tree Lucuma nervosa (Sapotaceae) 期刊论文
ACTA SOCIETATIS BOTANICORUM POLONIAE, 2018, 卷号: 87, 期号: 2, 页码: 3585
Authors:  Niu, Ying-Feng;  Ni, Shu-Bang;  Liu, Zi-Yan;  Zheng, Cheng;  Mao, Chang-Li;  Shi, Chao;  Liu, Jin
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The complete chloroplast genome of tropical and sub-tropical fruit tree Lucuma nervosa (Sapotaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 卷号: 3, 期号: 1, 页码: 440-441
Authors:  Niu, Ying-Feng;  Ni, Shu-Bang;  Liu, Zi-Yan;  Zheng, Cheng;  Mao, Chang-Li;  Shi, Chao;  Liu, Jin
Favorite  |  View/Download：16/0  |  Submit date：2019/03/29
Chloroplast genome  Lucuma nervosa  Sapotaceae  
The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis 期刊论文
MOLECULAR PLANT, 2017, 卷号: 10, 页码: 866-877
Authors:  Xia, En-Hua;  Zhang, Hai-Bin;  Sheng, Jun;  Li, Kui;  Zhang, Qun-Jie;  Kim, Changhoon;  Zhang, Yun;  Liu, Yuan;  Zhu, Ting;  Li, Wei;  Huang, Hui;  Tong, Yan;  Nan, Hong;  Shi, Cong;  Shi, Chao;  Jiang, Jian-Jun;  Mao, Shu-Yan;  Jiao, Jun-Ying;  Zhang, Dan;  Zhao, Yuan;  Zhao, You-Jie;  Zhang, Li-Ping;  Liu, Yun-Long;  Liu, Ben-Ying;  Yu, Yue;  Shao, Sheng-Fu;  Ni, De-Jiang;  Eichler, Evan E.;  Gao, Li-Zhi
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Tea Tree Genome  Comparative Genomics  Tea Flavor  Tea-proccessing Suitability  Global Adaptation  Caffeine Biosynthesis  
Fungal diversity notes 253-366: taxonomic and phylogenetic contributions to fungal taxa 期刊论文
FUNGAL DIVERSITY, 2016, 卷号: 78, 期号: 1, 页码: 1-237
Authors:  Li, Guo Jie;  Hyde, Kevin D.;  Zhao, Rui Lin;  Hongsanan, Sinang;  Abdel-Aziz, Faten Awad;  Abdel-Wahab, Mohamed A.;  Alvarado, Pablo;  Alves-Silva, Genivaldo;  Ammirati, Joseph F.;  Ariyawansa, Hiran A.;  Baghela, Abhishek;  Bahkali, Ali Hassan;  Beug, Michael;  Bhat, D. Jayarama;  Bojantchev, Dimitar;  Boonpratuang, Thitiya;  Bulgakov, Timur S.;  Camporesi, Erio;  Boro, Marcela C.;  Ceska, Oldriska;  Chakraborty, Dyutiparna;  Chen, Jia Jia;  Chethana, K. W. Thilini;  Chomnunti, Putarak;  Consiglio, Giovanni;  Cui, Bao Kai;  Dai, Dong Qin;  Dai, Yu Cheng;  Daranagama, Dinushani A.;  Das, Kanad;  Dayarathne, Monika C.;  De Crop, Eske;  De Oliveira, Rafael J. V.;  Fragoso de Souza, Carlos Alberto;  de Souza, Jose I.;  Dentinger, Bryn T. M.;  Dissanayake, Asha J.;  Doilom, Mingkwan;  Drechsler-Santos, E. Ricardo;  Ghobad-Nejhad, Masoomeh;  Gilmore, Sean P.;  Goes-Neto, Aristoteles;  Gorczak, Michal;  Haitjema, Charles H.;  Hapuarachchi, Kalani Kanchana;  Hashimoto, Akira;  He, Mao Qiang;  Henske, John K.;  Hirayama, Kazuyuki;  Iribarren, Maria J.;  Jayasiri, Subashini C.;  Jayawardena, Ruvishika S.;  Jeon, Sun Jeong;  Jernimo, Gustavo H.;  Jesus, Ana L.;  Jones, E. B. Gareth;  Kang, Ji Chuan;  Karunarathna, Samantha C.;  Kirk, Paul M.;  Konta, Sirinapa;  Kuhnert, Eric;  Langer, Ewald;  Lee, Haeng Sub;  Lee, Hyang Burm;  Li, Wen Jing;  Li, Xing Hong;  Liimatainen, Kare;  Lima, Diogo Xavier;  Lin, Chuan Gen;  Liu, Jian Kui;  Liu, Xings Zhong;  Liu, Zuo Yi;  Luangsa-ard, J. Jennifer;  Luecking, Robert;  Lumbsch, H. Thorsten;  Lumyong, Saisamorn;  Leano, Eduardo M.;  Marano, Agostina V.;  Matsumura, Misato;  McKenzie, Eric H. C.;  Mongkolsamrit, Suchada;  Mortimer, Peter E.;  Thi Thuong Thuong Nguyen;  Niskanen, Tuula;  Norphanphoun, Chada;  O'Malley, Michelle A.;  Parnmen, Sittiporn;  Pawlowska, Julia;  Perera, Rekhani H.;  Phookamsak, Rungtiwa;  Phukhamsakda, Chayanard;  Pires-Zottarelli, Carmen L. A.;  Raspe, Olivier;  Reck, Mateus A.;  Rocha, Sarah C. O.;  de Santiago, Andre L. C. M. A.;  Senanayake, Indunil C.;  Setti, Ledo;  Shang, Qiu Ju;  Singh, Sanjay K.;  Sir, Esteban B.;  Solomon, Kevin V.;  Song, Jie;  Srikitikulchai, Prasert;  Stadler, Marc;  Suetrong, Satinee;  Takahashi, Hayato;  Takahashi, Takumasa;  Tanaka, Kazuaki;  Tang, Li Ping;  Thambugala, Kasun M.;  Thanakitpipattana, Donnaya;  Theodorou, Michael K.;  Thongbai, Benjarong;  Thummarukcharoen, Tuksaporn;  Tian, Qing;  Tibpromma, Saowaluck;  Verbeken, Annemieke;  Vizzini, Alfredo;  Vlasak, Josef;  Voigt, Kerstin;  Wanasinghe, Dhanushka N.;  Wang, Yong;  Weerakoon, Gothamie;  Wen, Hua An;  Wen, Ting Chi;  Wijayawardene, Nalin N.;  Wongkanoun, Sarunyou;  Wrzosek, Marta;  Xiao, Yuan Pin;  Xu, Jian Chu;  Yan, Ji Ye;  Yang, Jing;  Yang, Shu Da;  Hu, Yu;  Zhang, Jin Feng;  Zhao, Jie;  Zhou, Li Wei;  Persoh, Derek;  Phillips, Alan J. L.;  Maharachchikumbura, Sajeewa S. N.
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Ascomycota  Basidiomycota  Neocallimastigomycota  Oomycota  Zygomycota  Phylogeny  Taxonomy  New Genus  New Species  
Rapid diversification of five Oryza AA genomes associated with rice adaptation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 卷号: 111, 期号: 46, 页码: E4954-E4962
Authors:  Zhang, Qun-Jie;  Zhu, Ting;  Xia, En-Hua;  Shi, Chao;  Liu, Yun-Long;  Zhang, Yun;  Liu, Yuan;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Zhang, Li-Ping;  Huang, Hui;  Jiao, Jun-Ying;  Xu, Ping-Zhen;  Yao, Qiu-Yang;  Zeng, Fan-Chun;  Yang, Li-Li;  Gao, Ju;  Tao, Da-Yun;  Wang, Yue-Ju;  Bennetzen, Jeffrey L.;  Gao, Li-Zhi;  Bennetzen,JL (reprint author),Univ Georgia,Dept Genet,Athens,GA 30602 USA.;  maize@uga.edu;  lgao@mail.kib.ac.cn
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Comparative Genomics  Full-genome Sequencing  Genomic Variation  Positive Selection  Oryza  
Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships 期刊论文
BMC Evolutionary Biology, 2014, 卷号: 14, 期号: 1
Authors:  Huang,Hui;  Shi,Chao;  Liu,Yuan;  Mao,Shu-Yan;  Gao,Li-Zhi
Favorite  |  View/Download：26/0  |  Submit date：2018/09/27
Camellia  Chloroplast genome  Phylogenetic relationships  Genomic structure  Taxonomic identification