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Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：166/75  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 204
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Wang,Yue-Hua;  Liu,Jie;  Zhu,An-Dan;  Hu,Jin-Yong;  Li,De-Zhu;  Gao,Lian-Ming
Adobe PDF(1937Kb)  |  收藏  |  浏览/下载：237/125  |  提交时间：2022/04/02
Anthocyanin synthesis  Comparative transcriptomics  Flower coloration  Gene expression  Rhododendron sanguineum complex  Sympatric speciation  RNA-SEQ DATA  TRANSCRIPTOME ANALYSIS  ANALYSIS REVEALS  BIOSYNTHESIS  GENERATION  ALIGNMENT  FLAVONOL  COPIGMENTATION  IDENTIFICATION  ACCUMULATION  
The Genomic Selfing Syndrome Accompanies the Evolutionary Breakdown of Heterostyly 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 1, 页码: 168-180
作者:  Wang,Xin-Jia;  Barrett,Spencer C. H.;  Zhong,Li;  Wu,Zhi-Kun;  Li,De-Zhu;  Wang,Hong;  Zhou,Wei
Adobe PDF(453Kb)  |  收藏  |  浏览/下载：108/35  |  提交时间：2022/04/02
deleterious mutations  effective population size  mating system  Primula  selection efficacy  ADAPTIVE MOLECULAR EVOLUTION  MATING SYSTEM  BREEDING SYSTEMS  DELETERIOUS MUTATIONS  PURIFYING SELECTION  POPULATION-SIZE  LINKAGE DISEQUILIBRIUM  INBREEDING DEPRESSION  PHYLOGENETIC ANALYSES  BACKGROUND SELECTION  
Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020
作者:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1428Kb)  |  收藏  |  浏览/下载：190/57  |  提交时间：2021/01/05
Complementary Transcriptome and Proteome Analyses Provide Insight into the Floral Transition in Bamboo (Dendrocalamus latiflorus Munro) 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020
作者:  Wang, Xiaoyan;  Wang, Yujiao;  Yang, Guoqian;  Zhao, Lei;  Zhang, Xuemei;  Li, Dezhu;  Guo, Zhenhua
Adobe PDF(3283Kb)  |  收藏  |  浏览/下载：144/33  |  提交时间：2021/01/05
Episodic and guanine-cytosine-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes 期刊论文
NEW PHYTOLOGIST, 2020
作者:  Liu, Fang;  Fan, Weishu;  Yang, Jun-Bo;  Xiang, Chun-Lei;  Mower, Jeffrey P.;  Li, De-Zhu;  Zhu, Andan
Adobe PDF(10010Kb)  |  收藏  |  浏览/下载：92/18  |  提交时间：2021/01/05
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
Adobe PDF(845Kb)  |  收藏  |  浏览/下载：313/111  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：396/76  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Genomic analysis reveals rich genetic variation and potential targets of selection during domestication of castor bean from perennial woody tree to annual semi-woody crop 期刊论文
PLANT DIRECT, 2019, 卷号: 3, 期号: 10, 页码: 16
作者:  Xu, Wei;  Yang, Tianquan;  Qiu, Lijun;  Chapman, Mark A.;  Li, De-Zhu;  Liu, Aizhong
Adobe PDF(4201Kb)  |  收藏  |  浏览/下载：180/20  |  提交时间：2020/03/24
castor bean  domestication selection  genetic variation  seed storage lipids  woody tree  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：275/35  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate