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High-quality Cymbidium mannii genome and multifaceted regulation of crassulacean acid metabolism in epiphytes 期刊论文
PLANT COMMUNICATIONS, 2023, 卷号: 4, 期号: 5, 页码: 100564
作者:  Fan,Weishu;  He,Zheng-Shan;  Zhe,Mengqing;  Feng,Jing-Qiu;  Zhang,Le;  Huang,Yiwei;  Liu,Fang;  Huang,Jia-Lin;  Ya,Ji-Dong;  Zhang,Shi-Bao;  Yang,Jun-Bo;  Zhu,Andan;  Li,De-Zhu
浏览  |  Adobe PDF(2893Kb)  |  收藏  |  浏览/下载：217/59  |  提交时间：2024/07/17
epiphytes  CAM photosynthesis  multi-omics  phase shifts  rhythmic metabolites  MASS-SPECTROMETRY  PHYLOGENETIC ANALYSIS  WIDE PREDICTION  EVOLUTION  CAM  SEQUENCE  ANNOTATION  ALIGNMENT  PATHWAYS  ORCHIDS  
A comparative full-length transcriptomic resource provides insight into the perennial monocarpic mass flowering 期刊论文
PLANT JOURNAL, 2023, 卷号: 116, 期号: 6, 页码: 1842-1855
作者:  Zhao,Jiu-Xia;  Wang,Shu;  Liu,Jiazhi;  Jiang,Xiao-Dong;  Wen,Jing;  Suo,Zhi-Quan;  Liu,Jie;  Zhong,Mi-Cai;  Wang,Qin;  Gu,Zhirong;  Liu,Changning;  Deng,Yunfei;  Hu,Jin-Yong;  Li,De-Zhu
浏览  |  Adobe PDF(3213Kb)  |  收藏  |  浏览/下载：216/41  |  提交时间：2024/07/10
perennial monocarpic mass flowering  Strobilanthes  ISO-seq  RNA-seq  BlueOmics  PSEUDO-RESPONSE REGULATORS  STROBILANTHES ACANTHACEAE  EXPRESSION ANALYSIS  GENE  TIME  PROTEIN  LONG  FKF1  PRR5  CLASSIFICATION  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
作者:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
浏览  |  Adobe PDF(6416Kb)  |  收藏  |  浏览/下载：229/40  |  提交时间：2024/05/09
East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Organelle Phylogenomics and Extensive Conflicting Phylogenetic Signals in the Monocot Order Poales 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12, 页码: 824672
作者:  Wu, Hong;  Yang, Jun-Bo;  Liu, Jing-Xia;  Li, De-Zhu;  Ma, Peng-Fei
浏览  |  Adobe PDF(6314Kb)  |  收藏  |  浏览/下载：152/39  |  提交时间：2024/08/21
Poales  phylogenomic conflict  plastome  mitochondrial  nuclear  EVOLUTIONARY SIGNIFICANCE  PLASTID GENOMES  NUCLEAR GENES  SEQUENCE DATA  TREE  MITOCHONDRIAL  DIVERSIFICATION  FAMILIES  RBCL  CLASSIFICATION  
Phylogenomics and the flowering plant tree of life 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022
作者:  Guo, Cen;  Luo, Yang;  Gao, Lian-Ming;  Yi, Ting-Shuang;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu
浏览  |  Adobe PDF(1181Kb)  |  收藏  |  浏览/下载：284/46  |  提交时间：2024/08/21
angiosperms  hybridization  incomplete lineage sorting  orthology inference  phylogenetic conflicts  reduced representation sequencing  whole-genome sequencing  whole-genome duplication  SYSTEMATIC-ERRORS  RNA-SEQ  SEQUENCE CAPTURE  SEED PLANTS  DATA SETS  GENOME  EVOLUTION  RADSEQ  TOOL  CLASSIFICATION  
Comparative plastomic analysis and insights into the phylogeny of Salvia (Lamiaceae) 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 15-26
作者:  Wu,Hong;  Ma,Peng-Fei;  Li,Hong-Tao;  Hu,Guo-Xiong;  Li,De-Zhu
收藏  |  浏览/下载：220/0  |  提交时间：2022/04/02
Lamiaceae  Salvia subg. Glutinaria  Plastome  Phylogeny  COMPLETE CHLOROPLAST GENOME  ANCHORED HYBRID ENRICHMENT  SUBGENUS CALOSPHACE  STAMINAL EVOLUTION  SEQUENCE  DNA  MECHANISM  RADIATION  INFERENCE  SELECTION  
Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 16, 页码: 10794-10812
作者:  Wambulwa,Moses C.;  Milne,Richard;  Wu,Zeng-Yuan;  Spicer,Robert A.;  Provan,Jim;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Wang,Wan-Ting;  Wang,Hong;  Gao,Lian-Ming;  Li,De-Zhu;  Liu,Jie
浏览  |  Adobe PDF(2089Kb)  |  收藏  |  浏览/下载：353/83  |  提交时间：2022/04/02
biodiversity hotspot  climate change  elevational gradient  Himalayan flora  mountain ecosystem  spatiotemporal diversification  SPECIES RICHNESS PATTERNS  QINGHAI-TIBET PLATEAU  SOUTH ASIAN MONSOON  ELEVATIONAL GRADIENT  HENGDUAN MOUNTAINS  CLIMATE-CHANGE  BETA-DIVERSITY  QUATERNARY GLACIATION  GENETIC CONSEQUENCES  ARTIFICIAL DISPERSAL  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：350/131  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Rose without prickle: genomic insights linked to moisture adaptation 期刊论文
NATIONAL SCIENCE REVIEW, 2021, 卷号: 8, 期号: 12, 页码: nwab092
作者:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Yang,Guo-Qian;  Cui,Wei-Hua;  Suo,Zhi-Quan;  Wang,Wei-Jia;  Sun,Yi-Bo;  Wang,Dan;  Cheng,Xin-Chao;  Li,Xu-Ming;  Dong,Xue;  Tang,Kai-Xue;  Li,De-Zhu;  Hu,Jin-Yong
浏览  |  Adobe PDF(3063Kb)  |  收藏  |  浏览/下载：323/81  |  提交时间：2022/04/02
Rosa wichuraiana 'Basye's Thornless'  prickle-free  water storage  gene-regulatory-network (GRN)  QTL  TRICHOME DEVELOPMENT  PROVIDES INSIGHTS  FLOWERING TIME  TRANSCRIPTION  ARABIDOPSIS  INHERITANCE  EXPRESSION  INITIATION  TRAITS  GENE  
Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 204
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Wang,Yue-Hua;  Liu,Jie;  Zhu,An-Dan;  Hu,Jin-Yong;  Li,De-Zhu;  Gao,Lian-Ming
浏览  |  Adobe PDF(1937Kb)  |  收藏  |  浏览/下载：387/148  |  提交时间：2022/04/02
Anthocyanin synthesis  Comparative transcriptomics  Flower coloration  Gene expression  Rhododendron sanguineum complex  Sympatric speciation  RNA-SEQ DATA  TRANSCRIPTOME ANALYSIS  ANALYSIS REVEALS  BIOSYNTHESIS  GENERATION  ALIGNMENT  FLAVONOL  COPIGMENTATION  IDENTIFICATION  ACCUMULATION