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Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
作者:  Gregory W. Stull
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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
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comparative genomics  origin  orphan gene  transposable element  
Plastome sequences help to improve the systematic position of trinerved Lindera species in the family Lauraceae 期刊论文
PEERJ, 2019, 卷号: 7, 页码: 17
作者:  Tian, Xiangyu;  Ye, Junwei;  Song, Yu
浏览  |  Adobe PDF(6746Kb)  |  收藏  |  浏览/下载：171/41  |  提交时间：2019/12/20
Lauraceae  Complete plastid genome  Lindera  Phylogenetic relationship  Comparative genomics  
Plastid phylogenomics improve phylogenetic resolution in the Lauraceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 17
作者:  Song, Yu;  Yu, Wen-Bin;  Tan, Yun-Hong;  Jin, Jian-Jun;  Wang, Bo;  Yang, Jun-Bo;  Liu, Bing;  Corlett, Richard T.
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chloroplast  Laurales  magnoliids  phylogenetic relationships  
Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
作者:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1214Kb)  |  收藏  |  浏览/下载：164/43  |  提交时间：2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
Plastome sequencing of Myripnois dioica and comparison within Asteraceae 期刊论文
PLANT DIVERSITY, 2019, 卷号: 41, 期号: 5, 页码: 315-322
作者:  Lin, Nan;  Zhang, Xu;  Deng, Tao;  Zhang, Jianwen;  Meng, Aiping;  Wang, Hengchang;  Sun, Hang;  Sun, Yanxia
浏览  |  Adobe PDF(2418Kb)  |  收藏  |  浏览/下载：186/36  |  提交时间：2020/03/02
Myripnois  Asteraceae  Plastomes  Large inversion  Phylogenomic analyses  
Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
作者:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
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Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Differential Quaternary dynamics of evergreen broadleaved forests in subtropical China revealed by phylogeography of Lindera aggregata (Lauraceae) 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 卷号: 46, 期号: 6, 页码: 1112-1123
作者:  Ye, Jun-Wei;  Li, De-Zhu;  Hampe, Arndt
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evergreen broadleaved forests  genetic break  Lindera aggregata  microrefugia  range expansion  secondary admixture  southern refugia model  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：298/30  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：269/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate