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Deep reticulation: the long legacy of hybridization in vascular plant evolution 期刊论文
PLANT JOURNAL, 2023, 卷号: 114, 期号: 4, 页码: 743-766
作者:  Stull,Gregory W.;  Pham,Kasey K.;  Soltis,Pamela S.;  Soltis,Douglas E.
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ancient hybridization  gene flow  phylogenomics  polyploidy  reticulation  vascular plants  CHLOROPLAST DNA  GENE FLOW  HYBRID SPECIATION  ANGIOSPERM DIVERSIFICATION  NATURAL HYBRIDIZATION  PHYLOGENETIC ANALYSES  SEED PLANTS  WHITE OAKS  SCALE DATA  POLYPLOIDY  
Home at last: Molecular phylogenetic analyses support subsuming Metastachydium within Phlomoides (Lamiaceae) 期刊论文
TAXON, 2023
作者:  Zhao,Yue;  Zhao,Fei;  Salmaki,Yasaman;  Paton,Alan;  Cai,Jie;  Drew,Bryan T.;  Mahmoudi,Chonour;  Efimov,Petr;  Turginov,Orzimat T.;  Liang,Cun-Zhu;  Chen,Ya-Ping;  Xiang,Chun-Lei
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Central Asia  Lamioideae  nrITS  Phlomideae  Phlomis  plastome phylogenomics  COMPLETE CHLOROPLAST GENOME  PLASTID DNA  LEPECHINIA LAMIACEAE  LAMIOIDEAE LAMIACEAE  CHARACTER EVOLUTION  NUCLEAR  CLASSIFICATION  POSITION  ORIGIN  GENERA  
Phylotranscriptomic analyses reveal deep gene tree discordance in Camellia (Theaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 188, 页码: 107912
作者:  Zhang,Qiong;  Folk,Ryan A.;  Mo,Zhi-Qiong;  Ye,Hang;  Zhang,Zhao-Yuan;  Peng,Hua;  Zhao,Jian-Li;  Yang,Shi-Xiong;  Yu,Xiang-Qin
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Camellia  Gene tree discordance  Transcriptome  Rapid diversification  Selective pressure  RNA-SEQ DATA  PHYLOGENETIC ANALYSIS  NUCLEAR GENES  SEQUENCE  EVOLUTION  RESOLUTION  HISTORY  INFERENCE  ALGORITHM  SELECTION  
Editorial: Rise to the challenges in plastome phylogenomics 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1200302
作者:  Dong,Wenpan;  Gao,Lianming;  Xu,Chao;  Song,Yu;  Poczai,Peter
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plastome phylogenomics  incomplete lineage sorting  introgression  species tree  phylogenetic discordance  
Phylogeny and Biogeography of Morus (Moraceae) 期刊论文
AGRONOMY-BASEL, 2023, 卷号: 13, 期号: 8, 页码: 2021
作者:  Yang,Chen-Xuan;  Liu,Shui-Yin;  Zerega,Nyree J. C.;  Stull,Gregory W.;  Gardner,Elliot M.;  Tian,Qin;  Gu,Wei;  Lu,Qing;  Folk,Ryan A.;  Kates,Heather R.;  Guralnick,Robert P.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Wang,Yue-Hua;  Yi,Ting-Shuang
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ancestral area reconstruction  biogeography  dispersal  divergence times  Morus  phylogeny  MULBERRY  EASTERN  EVOLUTION  GENOME  TIME  ASIA  TOOL  
Multi-locus phylogeny of Bryoria reveals recent diversification and unexpected diversity in section Divaricatae 期刊论文
LICHENOLOGIST, 2023
作者:  Myllys,Leena;  Pino-Bodas,Raquel;  Velmala,Saara;  Wang,Li-Song;  Goward,Trevor
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fungal barcode  incomplete lineage sorting  ITS regions  lichen  species delimitation  SPECIES DELIMITATION  PCR PRIMERS  PARMELIACEAE  ASCOMYCOTA  DNA  EVOLUTION  TAXONOMY  LICHENS  USNEA  LECANORALES  
Phylogeny and evolution of Asparagaceae subfamily Nolinoideae: new insights from plastid phylogenomics 期刊论文
ANNALS OF BOTANY, 2022
作者:  Ji, Yunheng;  Landis, Jacob B.;  Yang, Jin;  Wang, Shuying;  Zhou, Nian;  Luo, Yan;  Liu, Haiyang
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Ancient hybridization  Convallarieae  incomplete lineage sorting  plastome  phylogeny  Polygonateae  Theropogon  RUSCACEAE SENSU-LATO  CHROMOSOME EVOLUTION  DIVERSIFICATION  FAMILIES  GENES  CLASSIFICATION  COMBINATIONS  ANGIOSPERMS  RESOLVES  PLATFORM  
豆科系统发育基因组学 学位论文
: 中国科学院大学, 2022
作者:  张荣
Adobe PDF(26213Kb)  |  收藏  |  浏览/下载:88/0  |  提交时间:2024/05/14
豆科,叶绿体基因组,线粒体基因组,转录组,深度和族级分支,冲 突,系统发育基因组学,快速辐射演化  Legumimosae, plastome, mitochondrial genome, transcriptome, deep and tribal lineages, conflict, phylogenomics, rapid radiation  
Phylogenomics and the flowering plant tree of life 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022
作者:  Guo, Cen;  Luo, Yang;  Gao, Lian-Ming;  Yi, Ting-Shuang;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu
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angiosperms  hybridization  incomplete lineage sorting  orthology inference  phylogenetic conflicts  reduced representation sequencing  whole-genome sequencing  whole-genome duplication  SYSTEMATIC-ERRORS  RNA-SEQ  SEQUENCE CAPTURE  SEED PLANTS  DATA SETS  GENOME  EVOLUTION  RADSEQ  TOOL  CLASSIFICATION  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
作者:  Gregory W. Stull
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