Plastome sequencing of Myripnois dioica and comparison within Asteraceae

doi:10.1016/j.pld.2019.07.003

	Plastome sequencing of Myripnois dioica and comparison within Asteraceae
	Lin, Nan 1,2,3; Zhang, Xu 1,2; Deng, Tao3 ; Zhang, Jianwen3 ; Meng, Aiping 1; Wang, Hengchang 1; Sun, Hang3 ; Sun, Yanxia 1
通讯作者	Sun, Hang(sunhang@mail.kib.ac.cn) ; Sun, Yanxia(sunyanxia@wbgcas.cn)
	2019-10-01
发表期刊	PLANT DIVERSITY
ISSN	2096-2703
卷号	41 期号:5 页码:315-322
摘要	Myripnois is a monotypic shrub genus in the daisy family constricted to northern China. Although wild populations of Myripnois dioica are relatively rare, this plant may potentially be cultured as a fine ornamental. In the present study, we sequenced the complete plastome of M. dioica, generating the first plastome sequences of the subfamily Pertyoideae. The plastome of M. dioica has a typical quadripartite circular structure. A large similar to 20-kb and a small similar to 3-kb inversion were detected in the large single copy (LSC) region and shared by other Asteraceae species. Plastome phylogenomic analyses based on 78 Asteraceae species and three outgroups revealed four groups, corresponding to four Asteraceae subfamilies: Asteroideae, Cichorioideae, Pertyoideae and Carduoideae. Among these four subfamilies, Pertyoideae is sister to Asteroideae thorn Cichorioideae; Carduoideae is the most basal clade. In addition, we characterized 13 simple sequence repeats (SSRs) that may be useful in future studies on population genetics. Copyright (C) 2019 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd.
关键词	Myripnois Asteraceae Plastomes Large inversion Phylogenomic analyses
DOI	10.1016/j.pld.2019.07.003
收录类别	SCI ; SCI
语种	英语
WOS记录号	WOS:000497462900004
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/70121
专题	中国西南野生生物种质资源库
通讯作者	Sun, Hang; Sun, Yanxia
作者单位	1.Chinese Acad Sci, CAS Key Lab Plant Germplasm Enhancement & Special, Wuhan Bot Garden, Wuhan 430074, Hubei, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China
推荐引用方式 GB/T 7714	Lin, Nan,Zhang, Xu,Deng, Tao,et al. Plastome sequencing of Myripnois dioica and comparison within Asteraceae[J]. PLANT DIVERSITY,2019,41(5):315-322.
APA	Lin, Nan.,Zhang, Xu.,Deng, Tao.,Zhang, Jianwen.,Meng, Aiping.,...&Sun, Yanxia.(2019).Plastome sequencing of Myripnois dioica and comparison within Asteraceae.PLANT DIVERSITY,41(5),315-322.
MLA	Lin, Nan,et al."Plastome sequencing of Myripnois dioica and comparison within Asteraceae".PLANT DIVERSITY 41.5(2019):315-322.

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