| Plastome sequencing of Myripnois dioica and comparison within Asteraceae | |
Lin, Nan1,2,3; Zhang, Xu1,2; Deng, Tao3 ; Zhang, Jianwen3; Meng, Aiping1; Wang, Hengchang1; Sun, Hang3; Sun, Yanxia1
| |
| Corresponding Author | Sun, Hang(sunhang@mail.kib.ac.cn) ; Sun, Yanxia(sunyanxia@wbgcas.cn) |
| 2019-10-01 | |
| Source Publication | PLANT DIVERSITY
 |
| ISSN | 2096-2703 |
| Volume | 41Issue:5Pages:315-322 |
| Abstract | Myripnois is a monotypic shrub genus in the daisy family constricted to northern China. Although wild populations of Myripnois dioica are relatively rare, this plant may potentially be cultured as a fine ornamental. In the present study, we sequenced the complete plastome of M. dioica, generating the first plastome sequences of the subfamily Pertyoideae. The plastome of M. dioica has a typical quadripartite circular structure. A large similar to 20-kb and a small similar to 3-kb inversion were detected in the large single copy (LSC) region and shared by other Asteraceae species. Plastome phylogenomic analyses based on 78 Asteraceae species and three outgroups revealed four groups, corresponding to four Asteraceae subfamilies: Asteroideae, Cichorioideae, Pertyoideae and Carduoideae. Among these four subfamilies, Pertyoideae is sister to Asteroideae thorn Cichorioideae; Carduoideae is the most basal clade. In addition, we characterized 13 simple sequence repeats (SSRs) that may be useful in future studies on population genetics. Copyright (C) 2019 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd. |
| Keyword | Myripnois Asteraceae Plastomes Large inversion Phylogenomic analyses |
| DOI | 10.1016/j.pld.2019.07.003 |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| WOS ID | WOS:000497462900004 |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.kib.ac.cn/handle/151853/70121 |
| Collection | 中国西南野生生物种质资源库 |
| Corresponding Author | Sun, Hang; Sun, Yanxia |
| Affiliation | 1.Chinese Acad Sci, CAS Key Lab Plant Germplasm Enhancement & Special, Wuhan Bot Garden, Wuhan 430074, Hubei, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China |
| Recommended Citation GB/T 7714 | Lin, Nan,Zhang, Xu,Deng, Tao,et al. Plastome sequencing of Myripnois dioica and comparison within Asteraceae[J]. PLANT DIVERSITY,2019,41(5):315-322. |
| APA | Lin, Nan.,Zhang, Xu.,Deng, Tao.,Zhang, Jianwen.,Meng, Aiping.,...&Sun, Yanxia.(2019).Plastome sequencing of Myripnois dioica and comparison within Asteraceae.PLANT DIVERSITY,41(5),315-322. |
| MLA | Lin, Nan,et al."Plastome sequencing of Myripnois dioica and comparison within Asteraceae".PLANT DIVERSITY 41.5(2019):315-322. |
| Files in This Item: | Download All | |||||
| File Name/Size | DocType | Version | Access | License | ||
| Lin-2019-Plastome se（2418KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Download | |
Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.
Edit Comment