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Rhododendron kuomeianum (Ericaceae), a new species from northeastern Yunnan (China), based on morphological and genomic data 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 4, 页码: 292-298
Authors:  Chang,Yu-Hang;  Yao,Gang;  Neilsen,Jens;  Liu,De-Tuan;  Zhang,Lu;  Ma,Yong-Peng
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Rhododendron  New species  RAD-seq  Phylogenetic position  GUIZHOU  
The diversification of the northern temperate woody flora - A case study of the Elm family (Ulmaceae) based on phylogenomic and paleobotanical evidence 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021
Authors:  Zhang,Qiu-Yue;  Deng,Min;  Bouchenak-Khelladi,Yanis;  Zhou,Zhe-Kun;  Hu,Guang-Wan;  Xing,Yao-Wu
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biogeography  diversification  fossil  phylogeny  temperate biome  Ulmaceae  LONG-DISTANCE DISPERSAL  INTERSPECIFIC HYBRIDIZATION  BIOGEOGRAPHY  SEQUENCE  EVOLUTIONARY  HISTORY  
Plastome Evolution in the Hyperdiverse Genus Euphorbia (Euphorbiaceae) Using Phylogenomic and Comparative Analyses: Large-Scale Expansion and Contraction of the Inverted Repeat Region 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 712064
Authors:  Wei,Neng;  Perez-Escobar,Oscar A.;  Musili,Paul M.;  Huang,Wei-Chang;  Yang,Jun-Bo;  Hu,Ai-Qun;  Hu,Guang-Wan;  Grace,Olwen M.;  Wang,Qing-Feng
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comparative genomics  organellar evolution  phylogenetic inference  plastome rearrangement  spurge family  structural variations  COMPLETE CHLOROPLAST GENOME  RETICULATE EVOLUTION  MOLECULAR PHYLOGENY  SUBSTITUTION RATES  MULTIPLE ALIGNMENT  DNA-SEQUENCES  CLASSIFICATION  REVEAL  PLANT  RECOMBINATION  
Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae 期刊论文
MOLECULAR PLANT, 2021, 卷号: 14, 期号: 5, 页码: 748-773
Authors:  Zhao,Yiyong;  Zhang,Rong;  Jiang,Kai-Wen;  Qi,Ji;  Hu,Yi;  Guo,Jing;  Zhu,Renbin;  Zhang,Taikui;  Egan,Ashley N.;  Yi,Ting-Shuang;  Huang,Chien-Hsun;  Ma,Hong
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Fabaceae  Leguminosae  nuclear phylogeny  divergence times  whole-genome duplication  rhizobial nodulation  COMPARATIVE GENOMICS  PHYLOGENETIC PERSPECTIVES  EARLY DIVERSIFICATION  PENALIZED LIKELIHOOD  ANCESTRAL POLYPLOIDY  MOLECULAR EVOLUTION  LOTUS-JAPONICUS  ANALYSES REVEAL  GENE  LEGUMINOSAE  
Plastome phylogenomics of the East Asian endemic genus Dobinea 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 35-42
Authors:  Liu,Changkun;  Yang,Jin;  Jin,Lei;  Wang,Shuying;  Yang,Zhenyan;  Ji,Yunheng
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Neo-endemism  Divergence  Dobinea delavayi  Dobinea vulgaris  Dobineeae  Anacardiaceae  QUANTITATIVE RECONSTRUCTION  MOLECULAR PHYLOGENETICS  EVOLUTIONARY HISTORY  CHLOROPLAST GENOME  SAPINDALES  MONSOON  NUCLEAR  CHINA  DIVERSIFICATION  ANACARDIACEAE  
The genome of Magnolia biondii Pamp. provides insights into the evolution of Magnoliales and biosynthesis of terpenoids 期刊论文
HORTICULTURE RESEARCH, 2021, 卷号: 8, 期号: 1, 页码: 38
Authors:  Dong,Shanshan;  Liu,Min;  Liu,Yang;  Chen,Fei;  Yang,Ting;  Chen,Lu;  Zhang,Xingtan;  Guo,Xing;  Fang,Dongming;  Li,Linzhou;  Deng,Tian;  Yao,Zhangxiu;  Lang,Xiaoan;  Gong,Yiqing;  Wu,Ernest;  Wang,Yaling;  Shen,Yamei;  Gong,Xun;  Liu,Huan;  Zhang,Shouzhou
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ALIGNMENT  IDENTIFICATION  PHYLOGENY  TOOL  ANGIOSPERMS  IMPROVEMENT  ANNOTATION  SUPPLEMENT  SEARCH  PLANTS  
Plastid phylogenomic insights into relationships of all flowering plant families 期刊论文
BMC BIOLOGY, 2021, 卷号: 19, 期号: 1, 页码: 232
Authors:  Li,Hong-Tao;  Luo,Yang;  Gan,Lu;  Ma,Peng-Fei;  Gao,Lian-Ming;  Yang,Jun-Bo;  Cai,Jie;  Gitzendanner,Matthew A.;  Fritsch,Peter W.;  Zhang,Ting;  Jin,Jian-Jun;  Zeng,Chun-Xia;  Wang,Hong;  Yu,Wen-Bin;  Zhang,Rong;  van der Bank,Michelle;  Olmstead,Richard G.;  Hollingsworth,Peter M.;  Chase,Mark W.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Yi,Ting-Shuang;  Li,De-Zhu
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Mesangiospermae  Tree of life  Interfamilial relationships  Plastome  PPA II  MULTIPLE SEQUENCE ALIGNMENT  EARLY DIVERSIFICATION  CHLOROPLAST GENOME  SEED PLANTS  SCALE DATA  ANGIOSPERMS  GENES  PHYLOGENETICS  RBCL  RESOLVES  
Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 756-773
Authors:  Guo,Cen;  Ma,Peng-Fei;  Yang,Guo-Qian;  Ye,Xia-Ying;  Guo,Ying;  Liu,Jing-Xia;  Liu,Yun-Long;  Eaton,Deren A. R.;  Guo,Zhen-Hua;  Li,De-Zhu
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Arundinarieae  ddRAD  paleopolyploid  genome skimming  rapid diversification  incongruence  ARUNDINARIEAE POACEAE BAMBUSOIDEAE  SOUTH CHINA SEA  WOODY BAMBOOS  PHYLOGENOMIC ANALYSES  ADAPTIVE RADIATION  ECOLOGICAL OPPORTUNITY  PLANT DIVERSIFICATION  ASIAN MONSOON  RADSEQ DATA  GENE TREES  
Characteristics of the complete chloroplast genome sequences of Stylidium debile and Stylidium petiolare (Stylidiaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 卷号: 6, 期号: 11, 页码: 3134-3136
Authors:  Li,Lin;  Liu,Guo-Ming;  Zhang,Zhi-Rong;  Corlett,Richard T.;  Yu,Wen-Bin
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Chloroplast genome  plastome  Stylidium debile  Stylidium petiolare  Stylidiaceae  
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 163, 页码: 107232
Authors:  Yang,Ying-Ying;  Qu,Xiao-Jian;  Zhang,Rong;  Stull,Gregory W.;  Yi,Ting-Shuang
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Betulaceae  Juglandaceae  Myricaceae  Quercus  Phylogenetics  Chloroplast capture  RESTRICTION SITE VARIATION  INTERSPECIFIC GENE FLOW  DNA-SEQUENCES  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  CLADISTIC-ANALYSIS  SEED PLANTS  NUCLEAR  BETULACEAE  DIVERSIFICATION