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Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of plastid genes 期刊论文
BMC Plant Biology, 2020, 卷号: 20, 期号: 1
Authors:  Zhang,Xu;  Sun,Yanxia;  Landis,Jacob B.;  Lv,Zhenyu;  Shen,Jun;  Zhang,Huajie;  Lin,Nan;  Li,Lijuan;  Sun,Jiao;  Deng,Tao;  Sun,Hang;  Wang,Hengchang
Favorite  |  View/Download:20/0  |  Submit date:2020/08/17
Plastome  Phylogenetic discordance  Gentianeae  Coalescence  Gene trees  Nucleotide substitution rates  Gene characteristics  Phylogenetic informativeness  
Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020, 卷号: 69, 期号: 4, 页码: 613-622
Authors:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
Favorite  |  View/Download:17/0  |  Submit date:2020/08/17
Leguminosae  maximum likelihood  phylogenetic conflict  plastome  recalcitrant relationships  stochasticity  systematic error  
Comparative analysis of complete plastid genome reveals powerful barcode regions for identifying wood of Dalbergia odorifera and D. tonkinensis (Leguminosae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 页码: 12
Authors:  Qin, Ming;  Zhu, Cheng-Jie;  Yang, Jun-Bo;  Vatanparast, Mohammad;  Schley, Rowan;  Lai, Qiang;  Zhang, Dan-Yan;  Tu, Tie-Yao;  Klitgard, Bente B.;  Li, Shi-Jin;  Zhang, Dian-Xiang
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DNA barcoding  Fabaceae  Hongmu  phylogenomics  rosewood  wood identification  
Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae) 期刊论文
PLOS ONE, 2020, 卷号: 15, 期号: 5, 页码: 25
Authors:  Zhao, Fei;  Li, Bo;  Drew, Bryan T.;  Chen, Ya-Ping;  Wang, Qiang;  Yu, Wen-Bin;  Liu, En-De;  Salmaki, Yasaman;  Peng, Hua;  Xiang, Chun-Lei
Favorite  |  View/Download:8/0  |  Submit date:2020/08/17
Plastome Evolution in Dolomiaea (Asteraceae, Cardueae) Using Phylogenomic and Comparative Analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 11, 页码: 15
Authors:  Shen, Jun;  Zhang, Xu;  Landis, Jacob B.;  Zhang, Huajie;  Deng, Tao;  Sun, Hang;  Wang, Hengchang
Favorite  |  View/Download:31/0  |  Submit date:2020/06/15
Dolomiaea  plastomes  alpine environments  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  
Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1, 页码: 14
Authors:  Ji, Yunheng;  Yang, Lifang;  Chase, Mark W.;  Liu, Changkun;  Yang, Zhenyan;  Yang, Jin;  Yang, Jun-Bo;  Yi, Ting-Shuang
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Plastid phylogenomics  Biogeography  Radiative diversification  Cytonuclear discordance  Large genome size  Parideae  Paris  Melanthiaceae  Trilliaceae  
Evolutionary patterns of chimeric retrogenes in Oryza species 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 12
Authors:  Zhou, Yanli;  Zhang, Chengjun
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Phylogenomic analysis reveals multiple evolutionary origins of selfing from outcrossing in a lineage of heterostylous plants 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 224, 期号: 3, 页码: 1290-1303
Authors:  Zhong, Li;  Barrett, Spencer C. H.;  Wang, Xin-Jia;  Wu, Zhi-Kun;  Sun, Hua-Ying;  Li, De-Zhu;  Wang, Hong;  Zhou, Wei
View  |  Adobe PDF(1748Kb)  |  Favorite  |  View/Download:60/10  |  Submit date:2020/03/26
floral evolution  genetic diversity  heterostyly  homostyly  mating systems  phylogenomics  Primula  selfing  
Plastid phylogenomics and biogeographic analysis support a trans-Tethyan origin and rapid early radiation of Cornales in the Mid-Cretaceous 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 140, 页码: 16
Authors:  Fu, Chao-Nan;  Mo, Zhi-Qiong;  Yang, Jun-Bo;  Ge, Xue-Jun;  Li, De-Zhu;  Xiang, Qiu-Yun (Jenny);  Gao, Lian-Ming
View  |  Adobe PDF(3381Kb)  |  Favorite  |  View/Download:84/7  |  Submit date:2019/12/20
Biogeography  Character coding  Cornales  Plastid genome  Phylogenomics  
Plastome phylogenomic analysis of Torreya (Taxaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 6, 页码: 607-615
Authors:  Zhang, Xu;  Zhang, Hua-Jie;  Landis, Jacob B.;  Deng, Tao;  Meng, Ai-Ping;  Sun, Hang;  Peng, Yan-Song;  Wang, Heng-Chang;  Sun, Yan-Xia
Favorite  |  View/Download:5/0  |  Submit date:2020/08/17
biogeographical analysis  diversification  phylogenetic analysis  plastome  Torreya