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Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
作者:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
浏览  |  Adobe PDF(6416Kb)  |  收藏  |  浏览/下载：21/5  |  提交时间：2024/05/09
East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 16, 页码: 10794-10812
作者:  Wambulwa,Moses C.;  Milne,Richard;  Wu,Zeng-Yuan;  Spicer,Robert A.;  Provan,Jim;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Wang,Wan-Ting;  Wang,Hong;  Gao,Lian-Ming;  Li,De-Zhu;  Liu,Jie
浏览  |  Adobe PDF(2089Kb)  |  收藏  |  浏览/下载：180/62  |  提交时间：2022/04/02
biodiversity hotspot  climate change  elevational gradient  Himalayan flora  mountain ecosystem  spatiotemporal diversification  SPECIES RICHNESS PATTERNS  QINGHAI-TIBET PLATEAU  SOUTH ASIAN MONSOON  ELEVATIONAL GRADIENT  HENGDUAN MOUNTAINS  CLIMATE-CHANGE  BETA-DIVERSITY  QUATERNARY GLACIATION  GENETIC CONSEQUENCES  ARTIFICIAL DISPERSAL  
Plastid phylogenomic insights into relationships of all flowering plant families 期刊论文
BMC BIOLOGY, 2021, 卷号: 19, 期号: 1, 页码: 232
作者:  Li,Hong-Tao;  Luo,Yang;  Gan,Lu;  Ma,Peng-Fei;  Gao,Lian-Ming;  Yang,Jun-Bo;  Cai,Jie;  Gitzendanner,Matthew A.;  Fritsch,Peter W.;  Zhang,Ting;  Jin,Jian-Jun;  Zeng,Chun-Xia;  Wang,Hong;  Yu,Wen-Bin;  Zhang,Rong;  van der Bank,Michelle;  Olmstead,Richard G.;  Hollingsworth,Peter M.;  Chase,Mark W.;  Soltis,Douglas E.;  Soltis,Pamela S.;  Yi,Ting-Shuang;  Li,De-Zhu
浏览  |  Adobe PDF(2636Kb)  |  收藏  |  浏览/下载：127/28  |  提交时间：2022/04/02
Mesangiospermae  Tree of life  Interfamilial relationships  Plastome  PPA II  MULTIPLE SEQUENCE ALIGNMENT  EARLY DIVERSIFICATION  CHLOROPLAST GENOME  SEED PLANTS  SCALE DATA  ANGIOSPERMS  GENES  PHYLOGENETICS  RBCL  RESOLVES  
Plastid NDH Pseudogenization and Gene Loss in a Recently Derived Lineage from the Largest Hemiparasitic Plant Genus Pedicularis (Orobanchaceae ) 期刊论文
PLANT AND CELL PHYSIOLOGY, 2021, 卷号: 62, 期号: 6, 页码: 971-984
作者:  Li,Xin;  Yang,Jun-Bo;  Wang,Hong;  Song,Yu;  Corlett,Richard T.;  Yao,Xin;  Li,De-Zhu;  Yu,Wen-Bin
浏览  |  Adobe PDF(1695Kb)  |  收藏  |  浏览/下载：100/37  |  提交时间：2022/04/02
Hemiparasite  IR expansion  NA(D)H dehydrogenase-like complex  Orobanchaceae  Pseudogenization  Relaxation of selection  ACETYL-COA CARBOXYLASE  INVERTED REPEAT  LIFE-STYLE  ACCD GENE  EVOLUTION  GENOME  DIVERSITY  PHYLOGENY  SELECTION  INSIGHTS  
Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020
作者:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1428Kb)  |  收藏  |  浏览/下载：177/50  |  提交时间：2021/01/05
Complementary Transcriptome and Proteome Analyses Provide Insight into the Floral Transition in Bamboo (Dendrocalamus latiflorus Munro) 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020
作者:  Wang, Xiaoyan;  Wang, Yujiao;  Yang, Guoqian;  Zhao, Lei;  Zhang, Xuemei;  Li, Dezhu;  Guo, Zhenhua
浏览  |  Adobe PDF(3283Kb)  |  收藏  |  浏览/下载：136/32  |  提交时间：2021/01/05
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：299/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
作者:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(2351Kb)  |  收藏  |  浏览/下载：208/40  |  提交时间：2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny  
Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
作者:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
浏览  |  Adobe PDF(3915Kb)  |  收藏  |  浏览/下载：202/51  |  提交时间：2019/07/29
Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Forest community assembly is driven by different strata-dependent mechanisms along an elevational gradient 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 14
作者:  Luo, Ya-Huang;  Cadotte, Marc W.;  Burgess, Kevin S.;  Liu, Jie;  Tan, Shao-Lin;  Xu, Kun;  Li, De-Zhu;  Gao, Lian-Ming
浏览  |  Adobe PDF(3803Kb)  |  收藏  |  浏览/下载：168/46  |  提交时间：2019/10/14
environmental filtering  facilitation  functional diversity  limiting similarity  phylogenetic diversity  subalpine forest