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PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：263/28  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：237/28  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 222, 期号: 2, 页码: 1061-1075
作者:  Mower, Jeffrey P.;  Ma, Peng-Fei;  Grewe, Felix;  Taylor, Alex;  Michael, Todd P.;  VanBuren, Robert;  Qiu, Yin-Long
浏览  |  Adobe PDF(767Kb)  |  收藏  |  浏览/下载：145/24  |  提交时间：2019/06/24
evolutionary stasis  gene loss  inversion  Isoetes (quillworts)  Lycopodiaceae (clubmosses)  Lycopodiophyta (lycophytes)  plastid genome (plastome)  Selaginella (spikemosses)  
Assembly and comparative analyses of the mitochondrial genome of Castanospermum australe (Papilionoideae, Leguminosae) 期刊论文
AUSTRALIAN SYSTEMATIC BOTANY, 2019, 卷号: 32, 期号: 5-6, 页码: 484-494
作者:  Zhang, Rong;  Jin, Jian-Jun;  Moore, Michael J.;  Yi, Ting-Shuang
浏览  |  Adobe PDF(2840Kb)  |  收藏  |  浏览/下载：129/18  |  提交时间：2020/03/26
genome skimming  legume  mitochondrion  Moreton Bay chestnut  phylogeny  read-pair mapping  
Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2017, 卷号: 9, 期号: 9, 页码: 2354-2364
作者:  Song, Yu;  Yu, Wen-Bin;  Tan, Yunhong;  Liu, Bing;  Yao, Xin;  Jin, Jianjun;  Padmanaba, Michael;  Yang, Jun-Bo;  Corlett, Richard T.
浏览  |  Adobe PDF(1863Kb)  |  收藏  |  浏览/下载：206/56  |  提交时间：2017/10/23
Lauraceae  Chloroplast  Genome  Phylogenetic Relationship  Loss Event  
A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny 期刊论文
TAXON, 2017, 卷号: 66, 期号: 1, 页码: 44-77
作者:  Azani, Nasim;  Babineau, Marielle;  Bailey, C. Donovan;  Banks, Hannah;  Barbosa, Ariane R.;  Pinto, Rafael Barbosa;  Boatwright, James S.;  Borges, Leonardo M.;  Brown, Gillian K.;  Bruneau, Anne;  Candido, Elisa;  Cardoso, Domingos;  Chung, Kuo-Fang;  Clark, Ruth P.;  Conceicao, Adilva de S.;  Crisp, Michael;  Cubas, Paloma;  Delgado-Salinas, Alfonso;  Dexter, Kyle G.;  Doyle, Jeff J.;  Duminil, Jerome;  Egan, Ashley N.;  de la Estrella, Manuel;  Falcao, Marcus J.;  Filatov, Dmitry A.;  Fortuna-Perez, Ana Paula;  Fortunato, Renee H.;  Gagnon, Edeline;  Gasson, Peter;  Rando, Juliana Gastaldello;  Goulart de Azevedo Tozzi, Ana Maria;  Gunn, Bee;  Harris, David;  Haston, Elspeth;  Hawkins, Julie A.;  Herendeen, Patrick S.;  Hughes, Colin E.;  Iganci, Joao R. V.;  Javadi, Firouzeh;  Kanu, Sheku Alfred;  Kazempour-Osaloo, Shahrokh;  Kite, Geoffrey C.;  Klitgaard, Bente B.;  Kochanovski, Fabio J.;  Koenen, Erik J. M.;  Kovar, Lynsey;  Lavin, Matt;  le Roux, Marianne;  Lewis, Gwilym P.;  de Lima, Haroldo C.;  Lopez-Roberts, Maria Cristina;  Mackinder, Barbara;  Maia, Vitor Hugo;  Malecot, Valery;  Mansano, Vidal F.;  Marazzi, Brigitte;  Mattapha, Sawai;  Miller, Joseph T.;  Mitsuyuki, Chika;  Moura, Tania;  Murphy, Daniel J.;  Nageswara-Rao, Madhugiri;  Nevado, Bruno;  Neves, Danilo;  Ojeda, Dario I.;  Pennington, R. Toby;  Prado, Darirn E.;  Prenner, Gerhard;  de Queiroz, Luciano Paganucci;  Ramos, Gustavo;  Ranzato Filardi, Fabiana L.;  Ribeiro, Petala G.;  Rico-Arce, Maria de Lourdes;  Sanderson, Michael J.;  Santos-Silva, Juliana;  Sao-Mateus, Wallace M. B.;  Silva, Marcos J. S.;  Simon, Marcelo F.;  Sinou, Carole;  Snak, Cristiane;  de Souza, Elvia R.;  Sprent, Janet;  Steele, Kelly P.;  Steier, Julia E.;  Steeves, Royce;  Stirton, Charles H.;  Tagane, Shuichiro;  Torke, Benjamin M.;  Toyama, Hironori;  da Cruz, Daiane Trabuco;  Vatanparast, Mohammad;  Wieringa, Jan J.;  Wink, Michael;  Wojciechowski, Martin F.;  Yahara, Tetsukazu;  Yi, Tingshuang;  Zimmerman, Erin
Adobe PDF(23142Kb)  |  收藏  |  浏览/下载：461/70  |  提交时间：2017/03/07
Caesalpinioideae  Cercidoideae  Detarioideae  Dialioideae  Duparquetioideae  Mimosoid Clade  Papilionoideae  Plastid Matk Phylogeny  
DNA barcoding of Rhododendron (Ericaceae), the largest Chinese plant genus in biodiversity hotspots of the Himalaya-Hengduan Mountains 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2015, 卷号: 15, 期号: 4, 页码: 932-944
作者:  Yan, Li-Jun;  Liu, Jie;  Moeller, Michael;  Zhang, Lin;  Zhang, Xue-Mei;  Li, De-Zhu;  Gao, Lian-Ming
Adobe PDF(635Kb)  |  收藏  |  浏览/下载：470/188  |  提交时间：2015/07/20
Adaptive Radiation  Biodiversity Hotspots  Dna Barcoding  Rhododendron  Species Identification  The Himalaya-hengduan Mountains  
Low genetic diversity and high inbreeding of the endangered yews in Central Himalaya: implications for conservation of their highly fragmented populations 期刊论文
DIVERSITY AND DISTRIBUTIONS, 2014, 卷号: 20, 期号: 11, 页码: 1270-1284
作者:  Poudel, Ram C.;  Moeller, Michael;  Liu, Jie;  Gao, Lian-Ming;  Baral, Sushim R.;  Li, De-Zhu;  Gao,LM (reprint author),Chinese Acad Sci,Kunming Inst Bot,132 Lanhei Rd,Kunming 650201,Yunnan,Peoples R China.;  gaolm@mail.kib.ac.cn;  dzl@mail.kib.ac.cn
Adobe PDF(1552Kb)  |  收藏  |  浏览/下载：209/33  |  提交时间：2015/01/20
Climate Change  Conservation Genetics  Ecological Modelling  Habitat Degradation And Fragmentation  Taxus  Transect Survey  
Genetic diversity, demographical history and conservation aspects of the endangered yew tree Taxus contorta (syn. Taxus fuana) in Pakistan 期刊论文
TREE GENETICS & GENOMES, 2014, 卷号: 10, 期号: 3, 页码: 653-665
作者:  Poudel, Ram C.;  Moeller, Michael;  Li, De-Zhu;  Shah, Amin;  Gao, Lian-Ming;  Li,DZ (reprint author),Chinese Acad Sci,Key Lab Plant Divers & Biogeog East Asia,Kunming Inst Bot,132 Lanhei Rd,Kunming 650201,Yunnan,Peoples R China.;  dzl@mail.kib.ac.cn;  gaolm@mail.kib.ac.cn
Adobe PDF(1410Kb)  |  收藏  |  浏览/下载：376/93  |  提交时间：2014/06/23
Conservation  Habitat Fragmentation  Inbreeding  Chloroplast Dna  Nuclear Microsatellites  Western Himalaya  
Developmental Genetics of the Perianthless Flowers and Bracts of a Paleoherb Species, Saururus chinensis 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 1, 页码: e53019
作者:  Zhao, Yin-He;  Larson-Rabin, Zachary;  Wang, Guo-Ying;  Moeller, Michael;  Li, Cheng-Yun;  Zhang, Jin-Peng;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(828Kb)  |  收藏  |  浏览/下载：429/144  |  提交时间：2013/07/24
Floral Organ Identity  Mads-box Genes  Basal Angiosperms  Homeotic Genes  Core Eudicots  Arabidopsis  Expression  Evolution  Apetala3  Pistillata