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A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny
Azani, Nasim1; Babineau, Marielle2,3; Bailey, C. Donovan4; Banks, Hannah5; Barbosa, Ariane R.6; Pinto, Rafael Barbosa7; Boatwright, James S.8; Borges, Leonardo M.9; Brown, Gillian K.10; Bruneau, Anne2,3; Candido, Elisa7; Cardoso, Domingos11; Chung, Kuo-Fang12; Clark, Ruth P.5; Conceicao, Adilva de S.1,13; Crisp, Michael14; Cubas, Paloma15; Delgado-Salinas, Alfonso1,16; Dexter, Kyle G.17; Doyle, Jeff J.18; Duminil, Jerome19; Egan, Ashley N.20; de la Estrella, Manuel5; Falcao, Marcus J.21; Filatov, Dmitry A.22; Fortuna-Perez, Ana Paula23; Fortunato, Renee H.24,25; Gagnon, Edeline2,3; Gasson, Peter5; Rando, Juliana Gastaldello26; Goulart de Azevedo Tozzi, Ana Maria7; Gunn, Bee14; Harris, David27; Haston, Elspeth27; Hawkins, Julie A.28; Herendeen, Patrick S.29; Hughes, Colin E.30; Iganci, Joao R. V.31; Javadi, Firouzeh32; Kanu, Sheku Alfred33; Kazempour-Osaloo, Shahrokh34; Kite, Geoffrey C.5; Klitgaard, Bente B.5; Kochanovski, Fabio J.7; Koenen, Erik J. M.30; Kovar, Lynsey4; Lavin, Matt35; le Roux, Marianne36,37; Lewis, Gwilym P.5; de Lima, Haroldo C.21; Lopez-Roberts, Maria Cristina6; Mackinder, Barbara27; Maia, Vitor Hugo38; Malecot, Valery39; Mansano, Vidal F.21; Marazzi, Brigitte40; Mattapha, Sawai28; Miller, Joseph T.41; Mitsuyuki, Chika42; Moura, Tania43; Murphy, Daniel J.44; Nageswara-Rao, Madhugiri4; Nevado, Bruno22; Neves, Danilo5; Ojeda, Dario I.19; Pennington, R. Toby27; Prado, Darirn E.45; Prenner, Gerhard5; de Queiroz, Luciano Paganucci6; Ramos, Gustavo11; Ranzato Filardi, Fabiana L.21; Ribeiro, Petala G.6; Rico-Arce, Maria de Lourdes5; Sanderson, Michael J.46; Santos-Silva, Juliana13; Sao-Mateus, Wallace M. B.47; Silva, Marcos J. S.48; Simon, Marcelo F.49; Sinou, Carole30; Snak, Cristiane6; de Souza, Elvia R.13; Sprent, Janet50; Steele, Kelly P.51; Steier, Julia E.52; Steeves, Royce2,3; Stirton, Charles H.53; Tagane, Shuichiro42; Torke, Benjamin M.54; Toyama, Hironori42; da Cruz, Daiane Trabuco6; Vatanparast, Mohammad20; Wieringa, Jan J.55; Wink, Michael56; Wojciechowski, Martin F.52; Yahara, Tetsukazu42; Yi, Tingshuang57; Zimmerman, Erin2,3
2017-02-01
Source PublicationTAXON
Volume66Issue:1Pages:44-77
AbstractThe classification of the legume family proposed here addresses the long-known non-monophyly of the traditionally recognised subfamily Caesalpinioideae, by recognising six robustly supported monophyletic subfamilies. This new classification uses as its framework the most comprehensive phylogenetic analyses of legumes to date, based on plastid matK gene sequences, and including near-complete sampling of genera (698 of the currently recognised 765 genera) and ca. 20% (3696) of known species. The matK gene region has been the most widely sequenced across the legumes, and in most legume lineages, this gene region is sufficiently variable to yield well-supported clades. This analysis resolves the same major clades as in other phylogenies of whole plastid and nuclear gene sets (with much sparser taxon sampling). Our analysis improves upon previous studies that have used large phylogenies of the Leguminosae for addressing evolutionary questions, because it maximises generic sampling and provides a phylogenetic tree that is based on a fully curated set of sequences that are vouchered and taxonomically validated. The phylogenetic trees obtained and the underlying data are available to browse and download, facilitating subsequent analyses that require evolutionary trees. Here we propose a new community-endorsed classification of the family that reflects the phylogenetic structure that is consistently resolved and recognises six subfamilies in Leguminosae: a recircumscribed Caesalpinioideae DC., Cercidoideae Legume Phylogeny Working Group (stat. nov.), Detarioideae Burmeist., Dialioideae Legume Phylogeny Working Group (stat. nov.), Duparquetioideae Legume Phylogeny Working Group (stat. nov.), and Papilionoideae DC. The traditionally recognised subfamily Mimosoideae is a distinct clade nested within the recircumscribed Caesalpinioideae and is referred to informally as the mimosoid clade pending a forthcoming formal tribal and/or clade-based classification of the new Caesalpinioideae. We provide a key for subfamily identification, descriptions with diagnostic charactertistics for the subfamilies, figures illustrating their floral and fruit diversity, and lists of genera by subfamily. This new classification of Leguminosae represents a consensus view of the international legume systematics community; it invokes both compromise and practicality of use.
KeywordCaesalpinioideae Cercidoideae Detarioideae Dialioideae Duparquetioideae Mimosoid Clade Papilionoideae Plastid Matk Phylogeny
DOI10.12705/661.3
Indexed BySCI
Language英语
WOS Research AreaPlant Sciences ; Evolutionary Biology
WOS SubjectPlant Sciences ; Evolutionary Biology
WOS IDWOS:000397389100003
Citation statistics
Cited Times:219[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/33822
Collection中国西南野生生物种质资源库
Affiliation1.Univ Tehran, Dept Plant Sci, Tehran, Iran
2.Univ Montreal, Inst Rech & Biol Veg, Montreal, PQ, Canada
3.Univ Montreal, Dept Sci Biol, Montreal, PQ, Canada
4.New Mexico State Univ, Dept Biol, Las Cruces, NM USA
5.Royal Bot Gardens Kew, Richmond, Surrey, England
6.Univ Estadual Feira de Santana, Dept Ciencias Biol, Feira De Santana, Brazil
7.Univ Estadual Campinas, Dept Biol Vegetal, Campinas, SP, Brazil
8.Univ Western Cape, Dept Biodivers & Conservat Biol, Cape Town, South Africa
9.Univ Fed Sao Carlos, Dept Bot, Sao Carlos, SP, Brazil
10.Univ Melbourne, Australia & Queensland Herbarium, Sch Biosci, Toowong, Australia
11.Univ Fed Bahia, Inst Biol, Salvador, BA, Brazil
12.Natl Taiwan Univ, Sch Forestry & Resource Conservat, Taipei, Taiwan
13.Univ Estado Bahia, Dept Educ, Campus VIII, Paulo Afonso, Brazil
14.Australian Natl Univ, Res Sch Biol, Canberra, ACT, Australia
15.Univ Complutense, Dept Biol Veg 2, Madrid, Spain
16.Univ Nacl Autonoma Mexico, Inst Biol Botan, Mexico City, DF, Mexico
17.Univ Edinburgh, Sch GeoSci, Edinburgh, Midlothian, Scotland
18.Cornell Univ, Dept Plant Biol, Ithaca, NY USA
19.Univ Libre Bruxelles, Serv Evolut Biolog & Ecol, Brussels, Belgium
20.Natl Museum Nat Hist, Smithsonian Inst, Dept Bot, Washington, DC 20560 USA
21.Inst Pesquisas, Jardim Botan Rio De Janeiro, Rio De Janeiro, Brazil
22.Univ Oxford, Dept Plant Sci, Oxford, England
23.Univ Estadual Paulista, Dept Bot, Botucatu, SP, Brazil
24.Consejo Nacl Invest Cient & Tecn, CIRN INTA, Inst Recursos Biol, Buenos Aires, DF, Argentina
25.Univ Moron, Buenos Aires, DF, Argentina
26.Univ Fed Oeste Bahia, Ciencias Ambientais, Barreiras, Brazil
27.Royal Bot Gardens, Edinburgh, Midlothian, Scotland
28.Univ Reading, Sch Biol Sci, Reading, Berks, England
29.Chicago Bot Garden, Glencoe, IL USA
30.Univ Zurich, Dept Systemat & Evolutionary Bot, Zurich, Switzerland
31.Univ Fed Rio Grande do Sul, Dept Bot, Porto Alegre, RS, Brazil
32.Kyushu Univ, Inst Decis Sci Sustainable Soc, Fukuoka, Japan
33.Univ South Africa, Dept Agr & Anim Hlth, ZA-0001 Pretoria, South Africa
34.Tarbiat Modares Univ, Dept Plant Biol, Tehran, Iran
35.Montana State Univ, Plant Sci & Plant Pathol, Bozeman, MT USA
36.South African Natl Biodivers Inst, Silverton, South Africa
37.Univ Johannesburg, Dept Bot & Plant Biotechnol, Johannesburg, South Africa
38.Pontificia Univ Catolica Rio de Janeiro, Dept Biol, Rio De Janeiro, Brazil
39.Univ Angers, INRA, Agrocampus Ouest, Angers, France
40.Museo Cantonale Storia Nat, Lugano, Switzerland
41.Natl Sci Fdn, Off Int Sci & Engn, Arlington, VA 22230 USA
42.Kyushu Univ, Dept Biol, Fukuoka, Japan
43.Missouri Bot Garden, St Louis, MO USA
44.Royal Bot Gardens Victoria, Plant Sci & Biodivers, Melbourne, Vic, Australia
45.Univ Nacl Rosario, Fac Ciencias Agr, IICAR CONICET, Botan, Zavalla, Argentina
46.Univ Arizona, Dept Ecol & Evolutionary Biol, Tucson, AZ USA
47.Univ Fed Rio Grande do Norte, Sistemat Evolucao, Rio De Janeiro, Brazil
48.Univ Fed Goias, Inst Ciencias Biol, Dept Bot, Goiania, Go, Brazil
49.Embrapa Recursos Geneticos Biotecnol, Brasilia, DF, Brazil
50.Univ Dundee, Dept Plant Sci, Dundee, Scotland
51.Arizona State Univ Polytech, Fac Sci & Math, Mesa, AZ USA
52.Arizona State Univ, Sch Life Sci, Tempe, AZ USA
53.Univ Cape Town, Bolus Herbarium, Dept Biol Sci, Rondebosch, South Africa
54.Inst Systemat Bot, New York Bot Garden, Bronx, NY USA
55.Na Biodivers Ctr, Leiden, Netherlands
56.Heidelberg Univ, Inst Pharm & Mol Biotechnol, Heidelberg, Germany
57.Chinese Acad Sci, Kunming Inst Bot, Beijing, Peoples R China
Recommended Citation
GB/T 7714
Azani, Nasim,Babineau, Marielle,Bailey, C. Donovan,et al. A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny[J]. TAXON,2017,66(1):44-77.
APA Azani, Nasim.,Babineau, Marielle.,Bailey, C. Donovan.,Banks, Hannah.,Barbosa, Ariane R..,...&Zimmerman, Erin.(2017).A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny.TAXON,66(1),44-77.
MLA Azani, Nasim,et al."A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny".TAXON 66.1(2017):44-77.
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