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Plastid NDH Pseudogenization and Gene Loss in a Recently Derived Lineage from the Largest Hemiparasitic Plant Genus Pedicularis (Orobanchaceae ) 期刊论文
PLANT AND CELL PHYSIOLOGY, 2021, 卷号: 62, 期号: 6, 页码: 971-984
作者:  Li,Xin;  Yang,Jun-Bo;  Wang,Hong;  Song,Yu;  Corlett,Richard T.;  Yao,Xin;  Li,De-Zhu;  Yu,Wen-Bin
浏览  |  Adobe PDF(1695Kb)  |  收藏  |  浏览/下载：109/38  |  提交时间：2022/04/02
Hemiparasite  IR expansion  NA(D)H dehydrogenase-like complex  Orobanchaceae  Pseudogenization  Relaxation of selection  ACETYL-COA CARBOXYLASE  INVERTED REPEAT  LIFE-STYLE  ACCD GENE  EVOLUTION  GENOME  DIVERSITY  PHYLOGENY  SELECTION  INSIGHTS  
Episodic and guanine-cytosine-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes 期刊论文
NEW PHYTOLOGIST, 2020
作者:  Liu, Fang;  Fan, Weishu;  Yang, Jun-Bo;  Xiang, Chun-Lei;  Mower, Jeffrey P.;  Li, De-Zhu;  Zhu, Andan
浏览  |  Adobe PDF(10010Kb)  |  收藏  |  浏览/下载：88/17  |  提交时间：2021/01/05
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：304/30  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：272/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 11
作者:  Fu, Chao-Nan;  Wu, Chung-Shien;  Ye, Lin-Jiang;  Mo, Zhi-Qiong;  Liu, Jie;  Chang, Yu-Wen;  Li, De-Zhu;  Chaw, Shu-Miaw;  Gao, Lian-Ming
浏览  |  Adobe PDF(3412Kb)  |  收藏  |  浏览/下载：431/117  |  提交时间：2019/03/25
Comparative analyses of plastid genomes from fourteen Cornales species: inferences for phylogenetic relationships and genome evolution 期刊论文
BMC GENOMICS, 2017, 卷号: 18, 页码: 956
作者:  Fu, Chao-Nan;  Li, Hong-Tao;  Milne, Richard;  Zhang, Ting;  Ma, Peng-Fei;  Yang, Jing;  Li, De-Zhu;  Gao, Lian-Ming
浏览  |  Adobe PDF(3094Kb)  |  收藏  |  浏览/下载：489/30  |  提交时间：2018/05/08
Plastid Genome  Phylogenomics  Cornales  Alignment  Partitioning Schemes  Gene Loss  
Lineage-Specific Reductions of Plastid Genomes in an Orchid Tribe with Partially and Fully Mycoheterotrophic Species 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2016, 卷号: 8, 期号: 7, 页码: 2164-2175
作者:  Feng, Yan-Lei;  Wicke, Susann;  Li, Jian-Wu;  Han, Yu;  Lin, Choun-Sea;  Li, De-Zhu;  Zhou, Ting-Ting;  Huang, Wei-Chang;  Huang, Lu-Qi;  Jin, Xiao-Hua
浏览  |  Adobe PDF(1102Kb)  |  收藏  |  浏览/下载：164/47  |  提交时间：2016/11/04
Heterotrophy  Plastid Genome Reduction  Neottieae  Orchidaceae  Relaxed Selection  
Complete Plastid Genome Sequencing of Four Tilia Species (Malvaceae): A Comparative Analysis and Phylogenetic Implications 期刊论文
PLOS ONE, 2015, 卷号: 10, 期号: 11
作者:  Cai, Jie;  Ma, Peng-Fei;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1913Kb)  |  收藏  |  浏览/下载：207/56  |  提交时间：2016/05/04