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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
Adobe PDF(845Kb)  |  收藏  |  浏览/下载:290/107  |  提交时间:2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
作者:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
Adobe PDF(2351Kb)  |  收藏  |  浏览/下载:198/39  |  提交时间:2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny  
Greater than the sum of the parts: how the species composition in different forest strata influence ecosystem function 期刊论文
ECOLOGY LETTERS, 2019, 卷号: 22, 期号: 9, 页码: 1449-1461
作者:  Luo, Ya-Huang;  Cadotte, Marc W.;  Burgess, Kevin S.;  Liu, Jie;  Tan, Shao-Lin;  Zou, Jia-Yun;  Xu, Kun;  Li, De-Zhu;  Gao, Lian-Ming
Adobe PDF(1616Kb)  |  收藏  |  浏览/下载:252/36  |  提交时间:2019/08/19
Biodiversity-ecosystem function  different forest strata  functional traits  phylogenetic diversity  species composition  
Forest community assembly is driven by different strata-dependent mechanisms along an elevational gradient 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 14
作者:  Luo, Ya-Huang;  Cadotte, Marc W.;  Burgess, Kevin S.;  Liu, Jie;  Tan, Shao-Lin;  Xu, Kun;  Li, De-Zhu;  Gao, Lian-Ming
Adobe PDF(3803Kb)  |  收藏  |  浏览/下载:162/45  |  提交时间:2019/10/14
environmental filtering  facilitation  functional diversity  limiting similarity  phylogenetic diversity  subalpine forest  
Why is fruit colour so variable? Phylogenetic analyses reveal relationships between fruit-colour evolution, biogeography and diversification 期刊论文
GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2019, 卷号: 28, 期号: 7, 页码: 891-903
作者:  Lu, Lu;  Fritsch, Peter W.;  Matzke, Nicholas J.;  Wang, Hong;  Kron, Kathleen A.;  Li, De-Zhu;  Wiens, John J.
Adobe PDF(752Kb)  |  收藏  |  浏览/下载:188/27  |  提交时间:2019/07/29
biogeography  dispersal  diversification  Ericaceae  fruit  Gaultherieae  phylogeny  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1302Kb)  |  收藏  |  浏览/下载:279/28  |  提交时间:2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
Adobe PDF(1707Kb)  |  收藏  |  浏览/下载:354/59  |  提交时间:2019/07/29
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
Adobe PDF(4374Kb)  |  收藏  |  浏览/下载:258/31  |  提交时间:2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Upward elevation and northwest range shifts for alpine Meconopsis species in the Himalaya-Hengduan Mountains region 期刊论文
ECOLOGY AND EVOLUTION, 2019, 卷号: 9, 期号: 7, 页码: 4055-4064
作者:  He, Xie;  Burgess, Kevin S.;  Yang, Xue-Fei;  Ahrends, Antje;  Gao, Lian-Ming;  Li, De-Zhu
Adobe PDF(1036Kb)  |  收藏  |  浏览/下载:236/43  |  提交时间:2019/05/24
Alpine ecosystems  biodiversity hotspots  global climate change  Meconopsis  range shift  
Testing Darwin's transoceanic dispersal hypothesis for the inland nettle family (Urticaceae) 期刊论文
ECOLOGY LETTERS, 2018, 卷号: 21, 期号: 10, 页码: 1515-1529
作者:  Wu, Zeng-Yuan;  Liu, Jie;  Provan, Jim;  Wang, Hong;  Chen, Chia-Jui;  Cadotte, Marc W.;  Luo, Ya-Huang;  Amorim, Bruno S.;  Li, De-Zhu;  Milne, Richard I.
Adobe PDF(1871Kb)  |  收藏  |  浏览/下载:728/184  |  提交时间:2018/10/22
Biogeography  Ecological Traits  Long-distance Dispersal  Molecular Phylogeny  Ocean Current  Seed Viability  Urticaceae