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Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
作者:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
Adobe PDF(3915Kb)  |  收藏  |  浏览/下载：213/53  |  提交时间：2019/07/29
Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Why is fruit colour so variable? Phylogenetic analyses reveal relationships between fruit-colour evolution, biogeography and diversification 期刊论文
GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2019, 卷号: 28, 期号: 7, 页码: 891-903
作者:  Lu, Lu;  Fritsch, Peter W.;  Matzke, Nicholas J.;  Wang, Hong;  Kron, Kathleen A.;  Li, De-Zhu;  Wiens, John J.
Adobe PDF(752Kb)  |  收藏  |  浏览/下载：202/30  |  提交时间：2019/07/29
biogeography  dispersal  diversification  Ericaceae  fruit  Gaultherieae  phylogeny  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：301/30  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：271/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Comparative chloroplast genomes of eleven Schima (Theaceae) species: Insights into DNA barcoding and phylogeny 期刊论文
PLoS ONE, 2017, 卷号: 12, 期号: 6, 页码: e0178026
作者:  Yu, Xiang-Qin;  Drew, Bryan T.;  Yang, Jun-Bo;  Gao, Lian-Ming;  Li, De-Zhu
Adobe PDF(3146Kb)  |  收藏  |  浏览/下载：373/8  |  提交时间：2017/07/18
Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics 期刊论文
NEW PHYTOLOGIST, 2017, 卷号: 214, 期号: 3, 页码: 1355-1367
作者:  Zhang, Shu-Dong;  Jin, Jian-Jun;  Chen, Si-Yun;  Chase, Mark W.;  Soltis, Douglas E.;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1116Kb)  |  收藏  |  浏览/下载：443/105  |  提交时间：2017/07/10
Diversification  Phylogenomics  Plastome  Rapid Radiation  Rosaceae  Systematic Error  
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Qu, Xiao-Jian;  Jin, Jian-Jun;  Chaw, Shu-Miaw;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1287Kb)  |  收藏  |  浏览/下载：211/63  |  提交时间：2017/04/18
Phylogenomic analyses of large-scale nuclear genes provide new insights into the evolutionary relationships within the rosids 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2016, 卷号: 105, 期号: 1, 页码: 166-176
作者:  Zhao, Lei;  Li, Xia;  Zhang, Ning;  Zhang, Shu-Dong;  Yi, Ting-Shuang;  Ma, Hong;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(2059Kb)  |  收藏  |  浏览/下载：374/68  |  提交时间：2016/12/21
Coalescence  Rosids Phylogenomics  Nuclear Genes  Gene Tree  Species Tree  
Applying DNA Barcodes to Identify Closely Related Species of Ferns: A Case Study of the Chinese Adiantum (Pteridaceae) 期刊论文
PLOS ONE, 2016, 卷号: 11, 期号: 9, 页码: 1
作者:  Wang, Fan-Hong;  Lu, Jin-Mei;  Wen, Jun;  Ebihara, Atsushi;  Li, De-Zhu
浏览  |  Adobe PDF(3648Kb)  |  收藏  |  浏览/下载：200/33  |  提交时间：2017/01/05
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 3, 页码: 219-227
作者:  Zhang, Ting;  Zeng, Chun-Xia;  Yang, Jun-Bo;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1664Kb)  |  收藏  |  浏览/下载：321/121  |  提交时间：2017/01/05
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Nuclear Ribosomal Dna  Universal Primer Pairs