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Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1, 页码: 14
作者:  Ji, Yunheng;  Yang, Lifang;  Chase, Mark W.;  Liu, Changkun;  Yang, Zhenyan;  Yang, Jin;  Yang, Jun-Bo;  Yi, Ting-Shuang
浏览  |  Adobe PDF(3013Kb)  |  收藏  |  浏览/下载：197/47  |  提交时间：2020/03/18
Plastid phylogenomics  Biogeography  Radiative diversification  Cytonuclear discordance  Large genome size  Parideae  Paris  Melanthiaceae  Trilliaceae  
Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
作者:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1214Kb)  |  收藏  |  浏览/下载：169/44  |  提交时间：2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
浏览  |  Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：380/63  |  提交时间：2019/07/29
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：271/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Assembly and comparative analyses of the mitochondrial genome of Castanospermum australe (Papilionoideae, Leguminosae) 期刊论文
AUSTRALIAN SYSTEMATIC BOTANY, 2019, 卷号: 32, 期号: 5-6, 页码: 484-494
作者:  Zhang, Rong;  Jin, Jian-Jun;  Moore, Michael J.;  Yi, Ting-Shuang
浏览  |  Adobe PDF(2840Kb)  |  收藏  |  浏览/下载：190/26  |  提交时间：2020/03/26
genome skimming  legume  mitochondrion  Moreton Bay chestnut  phylogeny  read-pair mapping  
Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics 期刊论文
NEW PHYTOLOGIST, 2017, 卷号: 214, 期号: 3, 页码: 1355-1367
作者:  Zhang, Shu-Dong;  Jin, Jian-Jun;  Chen, Si-Yun;  Chase, Mark W.;  Soltis, Douglas E.;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1116Kb)  |  收藏  |  浏览/下载：443/105  |  提交时间：2017/07/10
Diversification  Phylogenomics  Plastome  Rapid Radiation  Rosaceae  Systematic Error  
Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication 期刊论文
TREE GENETICS & GENOMES, 2017, 卷号: 13, 期号: 2, 页码: 41
作者:  Wang, Yin-Huan;  Qu, Xiao-Jian;  Chen, Si-Yun;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(5516Kb)  |  收藏  |  浏览/下载：221/34  |  提交时间：2017/07/10
Plastome  Ir Expansion/contraction  Repeats  Mimosoideae  Sequence Divergence  Phylogenomics  
Phylogeny and biogeography of the amphi-Pacific genus Aphananthe 期刊论文
PLOS ONE, 2017, 卷号: 12, 期号: 2, 页码: 171405
作者:  Yang, Mei-Qing;  Li, De-Zhu;  Wen, Jun;  Yi, Ting-Shuang
浏览  |  Adobe PDF(2607Kb)  |  收藏  |  浏览/下载：223/46  |  提交时间：2017/04/19
A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny 期刊论文
TAXON, 2017, 卷号: 66, 期号: 1, 页码: 44-77
作者:  Azani, Nasim;  Babineau, Marielle;  Bailey, C. Donovan;  Banks, Hannah;  Barbosa, Ariane R.;  Pinto, Rafael Barbosa;  Boatwright, James S.;  Borges, Leonardo M.;  Brown, Gillian K.;  Bruneau, Anne;  Candido, Elisa;  Cardoso, Domingos;  Chung, Kuo-Fang;  Clark, Ruth P.;  Conceicao, Adilva de S.;  Crisp, Michael;  Cubas, Paloma;  Delgado-Salinas, Alfonso;  Dexter, Kyle G.;  Doyle, Jeff J.;  Duminil, Jerome;  Egan, Ashley N.;  de la Estrella, Manuel;  Falcao, Marcus J.;  Filatov, Dmitry A.;  Fortuna-Perez, Ana Paula;  Fortunato, Renee H.;  Gagnon, Edeline;  Gasson, Peter;  Rando, Juliana Gastaldello;  Goulart de Azevedo Tozzi, Ana Maria;  Gunn, Bee;  Harris, David;  Haston, Elspeth;  Hawkins, Julie A.;  Herendeen, Patrick S.;  Hughes, Colin E.;  Iganci, Joao R. V.;  Javadi, Firouzeh;  Kanu, Sheku Alfred;  Kazempour-Osaloo, Shahrokh;  Kite, Geoffrey C.;  Klitgaard, Bente B.;  Kochanovski, Fabio J.;  Koenen, Erik J. M.;  Kovar, Lynsey;  Lavin, Matt;  le Roux, Marianne;  Lewis, Gwilym P.;  de Lima, Haroldo C.;  Lopez-Roberts, Maria Cristina;  Mackinder, Barbara;  Maia, Vitor Hugo;  Malecot, Valery;  Mansano, Vidal F.;  Marazzi, Brigitte;  Mattapha, Sawai;  Miller, Joseph T.;  Mitsuyuki, Chika;  Moura, Tania;  Murphy, Daniel J.;  Nageswara-Rao, Madhugiri;  Nevado, Bruno;  Neves, Danilo;  Ojeda, Dario I.;  Pennington, R. Toby;  Prado, Darirn E.;  Prenner, Gerhard;  de Queiroz, Luciano Paganucci;  Ramos, Gustavo;  Ranzato Filardi, Fabiana L.;  Ribeiro, Petala G.;  Rico-Arce, Maria de Lourdes;  Sanderson, Michael J.;  Santos-Silva, Juliana;  Sao-Mateus, Wallace M. B.;  Silva, Marcos J. S.;  Simon, Marcelo F.;  Sinou, Carole;  Snak, Cristiane;  de Souza, Elvia R.;  Sprent, Janet;  Steele, Kelly P.;  Steier, Julia E.;  Steeves, Royce;  Stirton, Charles H.;  Tagane, Shuichiro;  Torke, Benjamin M.;  Toyama, Hironori;  da Cruz, Daiane Trabuco;  Vatanparast, Mohammad;  Wieringa, Jan J.;  Wink, Michael;  Wojciechowski, Martin F.;  Yahara, Tetsukazu;  Yi, Tingshuang;  Zimmerman, Erin
浏览  |  Adobe PDF(23142Kb)  |  收藏  |  浏览/下载：515/73  |  提交时间：2017/03/07
Caesalpinioideae  Cercidoideae  Detarioideae  Dialioideae  Duparquetioideae  Mimosoid Clade  Papilionoideae  Plastid Matk Phylogeny  
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Qu, Xiao-Jian;  Jin, Jian-Jun;  Chaw, Shu-Miaw;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1287Kb)  |  收藏  |  浏览/下载：211/63  |  提交时间：2017/04/18