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PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：298/30  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：269/34  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication 期刊论文
TREE GENETICS & GENOMES, 2017, 卷号: 13, 期号: 2, 页码: 41
作者:  Wang, Yin-Huan;  Qu, Xiao-Jian;  Chen, Si-Yun;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(5516Kb)  |  收藏  |  浏览/下载：220/34  |  提交时间：2017/07/10
Plastome  Ir Expansion/contraction  Repeats  Mimosoideae  Sequence Divergence  Phylogenomics  
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Qu, Xiao-Jian;  Jin, Jian-Jun;  Chaw, Shu-Miaw;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1287Kb)  |  收藏  |  浏览/下载：207/61  |  提交时间：2017/04/18
Phylogenomic analyses of large-scale nuclear genes provide new insights into the evolutionary relationships within the rosids 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2016, 卷号: 105, 期号: 1, 页码: 166-176
作者:  Zhao, Lei;  Li, Xia;  Zhang, Ning;  Zhang, Shu-Dong;  Yi, Ting-Shuang;  Ma, Hong;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(2059Kb)  |  收藏  |  浏览/下载：370/67  |  提交时间：2016/12/21
Coalescence  Rosids Phylogenomics  Nuclear Genes  Gene Tree  Species Tree  
Nuclear genetic variation of Rosa odorata var. gigantea (Rosaceae): population structure and conservation implications 期刊论文
TREE GENETICS & GENOMES, 2016, 卷号: 12, 期号: 4, 页码: 54
作者:  Meng, Jing;  He, Shui-Lian;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1828Kb)  |  收藏  |  浏览/下载：265/86  |  提交时间：2016/11/04
Conservation  Rosa  Genetic Diversity  Genetic Structure  Microsatellites  Single-copy Nuclear Gene  
Environmental and Historical Determinants of Patterns of Genetic Differentiation in Wild Soybean (Glycine soja Sieb. et Zucc) 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  He, Shui-Lian;  Wang, Yun-Sheng;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1468Kb)  |  收藏  |  浏览/下载：191/56  |  提交时间：2016/06/27
Biogeographic history of Pistacia (Anacardiaceae), emphasizing the evolution of the Madrean-Tethyan and the eastern Asian-Tethyan disjunctions 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2014, 卷号: 77, 页码: 136-146
作者:  Xie, Lei;  Yang, Zhi-Yun;  Wen, Jun;  Li, De-Zhu;  Yi, Ting-Shuang;  Wen,J (reprint author),Chinese Acad Sci,Kunming Inst Bot,Key Lab Plant Div & Biogeog East Asia,Plant Germplasm & Genom Ctr,Germplasm Bank Wild S,Kunming 650201,Yunnan,Peoples R China.;  wenj@si.edu;  tingshuangyi@mail.kib.ac.cn
Adobe PDF(1014Kb)  |  收藏  |  浏览/下载：433/136  |  提交时间：2014/07/28
Anacardiaceae  Eastern Asian-tethyan Disjunction  Intercontinental Disjunction  Madrean-tethyan Disjunction  Pistacia  Historical Biogeography  
Genetic Diversity and Population Structure: Implications for Conservation of Wild Soybean (Glycine soja Sieb. et Zucc) Based on Nuclear and Chloroplast Microsatellite Variation 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2012, 卷号: 13, 期号: 10, 页码: 12608-12628
作者:  He, Shuilian;  Wang, Yunsheng;  Volis, Sergei;  Li, Dezhu;  Yi, Tingshuang
Adobe PDF(767Kb)  |  收藏  |  浏览/下载：686/64  |  提交时间：2013/01/22
Glycine Soja  Microsatellite  Genetic Diversity  Genetic Structure  Bottleneck Effect  
Multi-gene analysis provides a well-supported phylogeny of Rosales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2011, 卷号: 60, 期号: 1, 页码: 21-28
作者:  Zhang, Shu-dong;  Soltis, Douglas E.;  Yang, Yang;  Li, De-zhu;  Yi, Ting-shuang
Adobe PDF(265Kb)  |  收藏  |  浏览/下载：1417/498  |  提交时间：2012/06/12
Barbeyaceae  Dirachmaceae  Phylogenetics  Rosales