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Fungal diversity notes 1611-1716: taxonomic and phylogenetic contributions on fungal genera and species emphasis in south China 期刊论文
FUNGAL DIVERSITY, 2023
Authors:  Senanayake,Indunil C.;  Rossi,Walter;  Leonardi,Marco;  Weir,Alex;  McHugh,Mark;  Rajeshkumar,Kunhiraman C.;  Verma,Rajnish K.;  Karunarathna,Samantha C.;  Tibpromma,Saowaluck;  Ashtekar,Nikhil;  Ashtamoorthy,Sreejith K.;  Raveendran,Sanjay;  Kour,Gurmeet;  Singh,Aishwarya;  De la Pena-Lastra,Saul;  Mateos,Antonio;  Kolarik,Miroslav;  Antonin,Vladimir;  Sevcikova,Hana;  Esteve-Raventos,Fernando;  Larsson,Ellen;  Pancorbo,Fermin;  Moreno,Gabriel;  Altes,Alberto;  Turegano,Yolanda;  Du,Tian-Ye;  Lu,Li;  Li,Qi-Rui;  Kang,Ji-Chuan;  Gunaseelan,Sugantha;  Kezo,Kezhocuyi;  Kaliyaperumal,Malarvizhi;  Fu,Jizhen;  Samarakoon,Milan C.;  Gafforov,Yusufjon;  Teshaboeva,Shakhnoza;  Kunjan,Pradeep C.;  Chamaparambath,Arya;  Flakus,Adam;  Etayo,Javier;  Rodriguez-Flakus,Pamela;  Zhurbenko,Mikhail P.;  de Silva,Nimali I.;  Tennakoon,Danushka S.;  Latha,K. P. Deepna;  Manimohan,Patinjareveettil;  Raj,K. N. Anil;  Calabon,Mark S.;  Ahmadpour,Abdollah;  Heidarian,Zeinab;  Alavi,Zahra;  Alavi,Fatemeh;  Ghosta,Youbert;  Azizi,Razmig;  Luo,Mei;  Zhao,Min-Ping;  Kularathnage,Nuwan D.;  Hua,Li;  Yang,Yun-Hui;  Liao,Chun-Fang;  Zhao,Hai-Jun;  Lestari,Anis S.;  Jayasiri,Subashini C.;  Yu,Feng-Ming;  Lei,Lei;  Liu,Jian-Wei;  Karimi,Omid;  Tang,Song-Ming;  Sun,Ya-Ru;  Wang,Yong;  Zeng,Ming;  Htet,Zin H.;  Linaldeddu,Benedetto T.;  Alves,Artur;  Phillips,Alan J. L.;  Bregant,Carlo;  Montecchio,Lucio;  De Kesel,Andre;  Hustad,Vincent P.;  Miller,Andrew N.;  Fedosova,Anna G.;  Kucera,Viktor;  Raza,Mubashar;  Hussain,Muzammil;  Chen,Yan-Peng;  Thiyagaraja,Vinodhini;  Gomdola,Deecksha;  Rathnayaka,Achala R.;  Dissanayake,Asha J.;  Suwannarach,Nakarin;  Hongsanan,Sinang;  Maharachchikumbura,Sajeewa S. N.;  Dissanayake,Lakmali S.;  Wijayawardene,Nalin N.;  Phookamsak,Rungtiwa;  Lumyong,Saisamorn;  Jones,E. B. Gareth;  Yapa,Neelamanie;  Wanasinghe,Dhanushka N.;  Xie,Ning;  Doilom,Mingkwan;  Manawasinghe,Ishara S.;  Liu,Jian-Kui (Jack);  Zhao,Qi;  Xu,Biao;  Hyde,Kevin D.;  Song,Jiage
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Agaricomycetes  Ascomycota  Basidiomycota  Dothideomycetes  Eurotiomycetes  Fungal diversity  Geoglossomycetes  Geographical distribution  Host records  Incertae sedis  Laboulbeniomycetes  Lecanoromycetes  Leotiomycetes  Novel taxa  New combination  Oomycota  Peronosporea  Pezizomycetes  Phylogeny  Sordariomycetes  South Chinese fungi  Taxonomy  MORPHO-MOLECULAR CHARACTERIZATION  FRESH-WATER FUNGI  SP. NOV.  LICHENICOLOUS FUNGI  1ST REPORT  GEN. NOV  NATURAL CLASSIFICATION  MULTIGENE PHYLOGENY  BIOLOGICAL-CONTROL  REFINED FAMILIES  
Telomere-to-telomere and haplotype-resolved genome assembly of the Chinese cork oak (Quercus variabilis) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1290913
Authors:  Wang,Longxin;  Li,Lei-Lei;  Chen,Li;  Zhang,Ren-Gang;  Zhao,Shi-Wei;  Yan,Han;  Gao,Jie;  Chen,Xue;  Si,Yu-Jun;  Chen,Zhe;  Liu,Haibo;  Xie,Xiao-Man;  Zhao,Wei;  Han,Biao;  Qin,Xiaochun;  Jia,Kai-Hua
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Quercus variabilis  genome assembly  telomere-to-telomere  gap-less  haplotype-resolved  PROGRAM  PROTEIN  TRANSCRIPTOME  ALIGNMENTS  PROVIDES  SYSTEM  
Comparative plastome genomics and phylogenetic relationships of the genus Trollius 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1293091
Authors:  Li,Jiaxin;  Du,Yan;  Xie,Lei;  Jin,Xiaohua;  Zhang,Zhirong;  Yang,Meiqing
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Trollius  plastome  comparative analysis  divergent hotspots  phylogenetic relationships  COMPLETE CHLOROPLAST GENOME  SEQUENCE  RANUNCULACEAE  REPEATS  PLANT  DNA  
Genome Skimming Contributes to Clarifying Species Limits in Paris Section Axiparis (Melanthiaceae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 832034
Authors:  Ji, Yunheng;  Yang, Jin;  Landis, Jacob B.;  Wang, Shuying;  Jin, Lei;  Xie, Pingxuan;  Liu, Haiyang;  Yang, Jun-Bo;  Yi, Ting-Shuang
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Variations in genetic diversity in cultivated Pistacia chinensis 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 1030647
Authors:  Han, Biao;  Zhang, Ming-Jia;  Xian, Yang;  Xu, Hui;  Cui, Cheng-Cheng;  Liu, Dan;  Wang, Lei;  Li, De-Zhu;  Li, Wen-Qing;  Xie, Xiao-Man
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discordance  genetic diversity  nuclear SNPs  Pistacia chinensis  plastome  MOLECULAR EVOLUTION  RATES  POPULATIONS  SELECTION  ALIGNMENT  HISTORY  
Alkaloids of Toddalia asiatica (Rutaceae) 期刊论文
BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2021, 卷号: 95, 页码: 104244
Authors:  Chen,Shan-Shan;  Xie,Tian-Zhen;  He,Ying-Jie;  Liu,Yang-Yang;  Li,Lei;  Zhao,Li-Xing;  Luo,Xiao-Dong
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Toddalia asiatica  Rutaceae  Benzophenanthridine alkaloids  Furoquinoline alkaloids  Chemotaxonomy  Network analysis  
Discovery of novel inhibitors against main protease (Mpro) of SARS-CoV-2 via virtual screening and biochemical evaluation 期刊论文
BIOORGANIC CHEMISTRY, 2021, 卷号: 110, 页码: 104767
Authors:  Guo,Sheng;  Xie,Hang;  Lei,Yu;  Liu,Bin;  Zhang,Li;  Xu,Yechun;  Zuo,Zhili
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SARS-CoV-2  Main protease  Virtual screening  Biochemical evaluation  
Fungal diversity notes 1277-1386: taxonomic and phylogenetic contributions to fungal taxa 期刊论文
FUNGAL DIVERSITY, 2020
Authors:  Yuan, Hai-Sheng;  Lu, Xu;  Dai, Yu-Cheng;  Hyde, Kevin D.;  Kan, Yu-He;  Kusan, Ivana;  He, Shuang-Hui;  Liu, Ning-Guo;  Sarma, V. Venkateswara;  Zhao, Chang-Lin;  Cui, Bao-Kai;  Yousaf, Nousheen;  Sun, Guangyu;  Liu, Shu-Yan;  Wu, Fang;  Lin, Chuan-Gen;  Dayarathne, Monika C.;  Gibertoni, Tatiana Baptista;  Conceicao, Lucas B.;  Garibay-Orijel, Roberto;  Villegas-Rios, Margarita;  Salas-Lizana, Rodolfo;  Wei, Tie-Zheng;  Qiu, Jun-Zhi;  Yu, Ze-Fen;  Phookamsak, Rungtiwa;  Zeng, Ming;  Paloi, Soumitra;  Bao, Dan-Feng;  Abeywickrama, Pranami D.;  Wei, De-Ping;  Yang, Jing;  Manawasinghe, Ishara S.;  Harishchandra, Dulanjalee;  Brahmanage, Rashika S.;  de Silva, Nimali I.;  Tennakoon, Danushka S.;  Karunarathna, Anuruddha;  Gafforov, Yusufjon;  Pem, Dhandevi;  Zhang, Sheng-Nan;  de Azevedo Santiago, Andre L. C. M.;  Bezerra, Jadson Diogo Pereira;  Dima, Balint;  Acharya, Krishnendu;  Alvarez-Manjarrez, Julieta;  Bahkali, Ali H.;  Bhatt, Vinod K.;  Brandrud, Tor Erik;  Bulgakov, Timur S.;  Camporesi, E.;  Cao, Ting;  Chen, Yu-Xi;  Chen, Yuan-Yuan;  Devadatha, Bandarupalli;  Elgorban, Abdallah M.;  Fan, Long-Fei;  Du, Xing;  Gao, Liu;  Goncalves, Camila Melo;  Gusmao, Luis F. P.;  Huanraluek, Naruemon;  Jadan, Margita;  Jayawardena, Ruvishika S.;  Khalid, Abdul Nasir;  Langer, Ewald;  Lima, Diogo X.;  de Lima-Junior, Nelson Correia;  de Lira, Carla Rejane Sousa;  Liu, Jian-Kui (Jack);  Liu, Shun;  Lumyong, Saisamorn;  Luo, Zong-Long;  Matocec, Neven;  Niranjan, M.;  Oliveira-Filho, Jose Ribamar Costa;  Papp, Viktor;  Perez-Pazos, Eduardo;  Phillips, Alan J. L.;  Qiu, Peng-Lei;  Ren, Yihua;  Ruiz, Rafael F. Castaneda;  Semwal, Kamal C.;  Soop, Karl;  de Souza, Carlos A. F.;  Souza-Motta, Cristina Maria;  Sun, Li-Hua;  Xie, Meng-Le;  Yao, Yi-Jian;  Zhao, Qi;  Zhou, Li-Wei
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The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements 期刊论文
GENOME BIOLOGY, 2020
Authors:  Liu, Ping-Li;  Zhang, Xi;  Mao, Jian-Feng;  Hong, Yan-Ming;  Zhang, Ren-Gang;  Yilan, E.;  Nie, Shuai;  Jia, Kaihua;  Jiang, Chen-Kun;  He, Jian;  Shen, Weiwei;  He, Qizouhong;  Zheng, Wenqing;  Abbas, Samar;  Jewaria, Pawan Kumar;  Tian, Xuechan;  Liu, Chang-jun;  Jiang, Xiaomei;  Yin, Yafang;  Liu, Bo;  Wang, Li;  Jin, Biao;  Ma, Yongpeng;  Qiu, Zongbo;  Baluska, Frantisek;  Samaj, Jozef;  He, Xinqiang;  Niu, Shihui;  Xie, Jianbo;  Xie, Lei;  Xu, Huimin;  Kong, Hongzhi;  Ge, Song;  Dixon, Richard A.;  Jiao, Yuannian;  Lin, Jinxing
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Biogeographic history of Pistacia (Anacardiaceae), emphasizing the evolution of the Madrean-Tethyan and the eastern Asian-Tethyan disjunctions 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2014, 卷号: 77, 页码: 136-146
Authors:  Xie, Lei;  Yang, Zhi-Yun;  Wen, Jun;  Li, De-Zhu;  Yi, Ting-Shuang;  Wen,J (reprint author),Chinese Acad Sci,Kunming Inst Bot,Key Lab Plant Div & Biogeog East Asia,Plant Germplasm & Genom Ctr,Germplasm Bank Wild S,Kunming 650201,Yunnan,Peoples R China.;  wenj@si.edu;  tingshuangyi@mail.kib.ac.cn
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Anacardiaceae  Eastern Asian-tethyan Disjunction  Intercontinental Disjunction  Madrean-tethyan Disjunction  Pistacia  Historical Biogeography