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Draft genomes of two outcrossing wild rice,Oryza rufipogonandO. longistaminata, reveal genomic features associated with mating-system evolution 期刊论文
PLANT DIRECT, 2020
作者:  Li, Wei;  Zhang, Qun-Jie;  Zhu, Ting;  Tong, Yan;  Li, Kui;  Shi, Cong;  Zhang, Yun;  Liu, Yun-Long;  Jiang, Jian-Jun;  Liu, Yuan;  Xia, En-Hua;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Dan;  Shi, Chao;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Jiao, Jun-ying;  Xu, Ping-Zhen;  Yang, Li-Li;  Gao, Li-Zhi
浏览  |  Adobe PDF(2847Kb)  |  收藏  |  浏览/下载：144/44  |  提交时间：2021/01/05
Improved hybrid de novo genome assembly and annotation of African wild rice, Oryza longistaminata, from Illumina and PacBio sequencing reads 期刊论文
PLANT GENOME, 2020
作者:  Li, Wei;  Li, Kui;  Zhang, Qun-jie;  Zhu, Ting;  Zhang, Yun;  Shi, Cong;  Liu, Yun-long;  Xia, En-hua;  Jiang, Jian-jun;  Shi, Chao;  Zhang, Li-ping;  Huang, Hui;  Tong, Yan;  Liu, Yuan;  Zhang, Dan;  Zhao, Yuan;  Jiang, Wen-kai;  Zhao, You-jie;  Mao, Shu-yan;  Jiao, Jun-ying;  Xu, Ping-zhen;  Yang, Li-li;  Yin, Guo-ying;  Gao, Li-zhi
浏览  |  Adobe PDF(2580Kb)  |  收藏  |  浏览/下载：168/67  |  提交时间：2021/01/05
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：386/73  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis 期刊论文
MOLECULAR PLANT, 2017, 卷号: 10, 页码: 866-877
作者:  Xia, En-Hua;  Zhang, Hai-Bin;  Sheng, Jun;  Li, Kui;  Zhang, Qun-Jie;  Kim, Changhoon;  Zhang, Yun;  Liu, Yuan;  Zhu, Ting;  Li, Wei;  Huang, Hui;  Tong, Yan;  Nan, Hong;  Shi, Cong;  Shi, Chao;  Jiang, Jian-Jun;  Mao, Shu-Yan;  Jiao, Jun-Ying;  Zhang, Dan;  Zhao, Yuan;  Zhao, You-Jie;  Zhang, Li-Ping;  Liu, Yun-Long;  Liu, Ben-Ying;  Yu, Yue;  Shao, Sheng-Fu;  Ni, De-Jiang;  Eichler, Evan E.;  Gao, Li-Zhi
浏览  |  Adobe PDF(778Kb)  |  收藏  |  浏览/下载：560/195  |  提交时间：2017/07/18
Tea Tree Genome  Comparative Genomics  Tea Flavor  Tea-proccessing Suitability  Global Adaptation  Caffeine Biosynthesis  
Full transcription of the chloroplast genome in photosynthetic eukaryotes 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  Shi, Chao;  Wang, Shuo;  Xia, En-Hua;  Jiang, Jian-Jun;  Zeng, Fan-Chun;  Gao, Li-Zhi
浏览  |  Adobe PDF(2371Kb)  |  收藏  |  浏览/下载：313/51  |  提交时间：2016/09/28
CandiSSR: An Efficient Pipeline used for Identifying Candidate Polymorphic SSRs Based on Multiple Assembled Sequences 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 6
作者:  Xia, En-Hua;  Yao, Qiu-Yang;  Zhang, Hai-Bin;  Jiang, Jian-Jun;  Zhang, Li-Ping;  Gao, Li-Zhi
浏览  |  Adobe PDF(3466Kb)  |  收藏  |  浏览/下载：258/49  |  提交时间：2016/05/04
Microsatellites  Transferability  Polymorphic Ssr  Candissr  Multiple Assembled Genomes  Multiple Assembled Transcriptomes  
Autotetraploid rice methylome analysis reveals methylation variation of transposable elements and their effects on gene expression 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 卷号: 112, 期号: 50, 页码: E7022-E7029
作者:  Zhang, Jie;  Liu, Yuan;  Xia, En-Hua;  Yao, Qiu-Yang;  Liu, Xiang-Dong;  Gao, Li-Zhi
浏览  |  Adobe PDF(2636Kb)  |  收藏  |  浏览/下载：335/90  |  提交时间：2016/02/01
Methylome  Autotetraploid Rice  Gene Expression  Genome-dosage Effect  Transposable Elements  
De novo transcriptome assembly of the wild relative of tea tree (Camellia taliensis) and comparative analysis with tea transcriptome identified putative genes associated with tea quality and stress response 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 页码: 298
作者:  Zhang, Hai-Bin;  Xia, En-Hua;  Huang, Hui;  Jiang, Jian-Jun;  Liu, Ben-Ying;  Gao, Li-Zhi;  Gao,LZ (reprint author),Chinese Acad Sci,Germplasm Bank Wild Species Southwest China,Kunming Inst Bot,Plant Germplasm & Genom Ctr,Kunming 650204,Peoples R China.;  Lgao@mail.kib.ac.cn
浏览  |  Adobe PDF(1163Kb)  |  收藏  |  浏览/下载：340/62  |  提交时间：2015/06/29
Contradiction between Plastid Gene Transcription and Function Due to Complex Posttranscriptional Splicing: An Exemplary Study of ycf15 Function and Evolution in Angiosperms 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 3, 页码: e59620
作者:  Shi, Chao;  Liu, Yuan;  Huang, Hui;  Xia, En-Hua;  Zhang, Hai-Bin;  Gao, Li-Zhi
浏览  |  Adobe PDF(4059Kb)  |  收藏  |  浏览/下载：402/67  |  提交时间：2013/06/08
Chloroplast Genome Sequence  Complete Nucleotide-sequence  Independent Transfers  Horizontal Transfer  Maximum-likelihood  Flowering Plants  Rna-metabolism  Nucleus  Dna  Organization