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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：292/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Plastome sequences help to improve the systematic position of trinerved Lindera species in the family Lauraceae 期刊论文
PEERJ, 2019, 卷号: 7, 页码: 17
作者:  Tian, Xiangyu;  Ye, Junwei;  Song, Yu
浏览  |  Adobe PDF(6746Kb)  |  收藏  |  浏览/下载：162/39  |  提交时间：2019/12/20
Lauraceae  Complete plastid genome  Lindera  Phylogenetic relationship  Comparative genomics  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：371/66  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Plastid phylogenomics improve phylogenetic resolution in the Lauraceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 17
作者:  Song, Yu;  Yu, Wen-Bin;  Tan, Yun-Hong;  Jin, Jian-Jun;  Wang, Bo;  Yang, Jun-Bo;  Liu, Bing;  Corlett, Richard T.
浏览  |  Adobe PDF(1151Kb)  |  收藏  |  浏览/下载：186/45  |  提交时间：2019/12/20
chloroplast  Laurales  magnoliids  phylogenetic relationships  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
作者:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(2351Kb)  |  收藏  |  浏览/下载：200/39  |  提交时间：2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny  
Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
作者:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
浏览  |  Adobe PDF(3915Kb)  |  收藏  |  浏览/下载：191/48  |  提交时间：2019/07/29
Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Phylogenomic analyses reveal intractable evolutionary history of a temperate bamboo genus (Poaceae: Bambusoideae) 期刊论文
PLANT DIVERSITY, 2019, 卷号: 41, 期号: 4, 页码: 213-219
作者:  Guo, Cen;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(690Kb)  |  收藏  |  浏览/下载：142/19  |  提交时间：2019/10/28
Shibataea  ddRAD-seq  Genome skimming  Phylogeny  Incongruence  
Pollination-Induced Transcriptome and Phylogenetic Analysis in Cymbidium tortisepalum (Orchidaceae) 期刊论文
RUSSIAN JOURNAL OF PLANT PHYSIOLOGY, 2019, 卷号: 66, 期号: 4, 页码: 618-627
作者:  Zhao, Y.;  Li, D.;  Liu, T.
浏览  |  Adobe PDF(909Kb)  |  收藏  |  浏览/下载：98/15  |  提交时间：2019/09/10
Cymbidium tortisepalum  ovary development  phylogenetic analysis  pollination  transcriptome  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：284/28  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
浏览  |  Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：359/60  |  提交时间：2019/07/29