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Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
作者:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
浏览  |  Adobe PDF(2234Kb)  |  收藏  |  浏览/下载：2/0  |  提交时间：2024/05/09
Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Genetic analysis of walnut cultivars from southwest China: Implications for germplasm improvement 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 6, 页码: 530-541
作者:  Wambulwa, Moses C.;  Fan, Peng-Zhen;  Milne, Richard;  Wu, Zeng-Yuan;  Luo, Ya-Huang;  Wang, Yue-Hua;  Wang, Hong;  Gao, Lian-Ming;  Xiahou, Zuo-Ying;  Jin, Ye-Chuan;  Ye, Lin-Jiang;  Xu, Zu-Chang;  Yang, Zhi-Chun;  Li, De-Zhu;  Liu, Jie
浏览  |  Adobe PDF(2036Kb)  |  收藏  |  浏览/下载：50/3  |  提交时间：2024/03/11
Inflorescences of Fargesia angustissima TP Yi and Yushania pauciramificans TP Yi (Poaceae, Bambusoideae) shed light on the taxonomy of the Sino-Himalayan alpine bamboos 期刊论文
PHYTOKEYS, 2022, 期号: 215, 页码: 27-36
作者:  Ye, Xia-Ying;  Xu, Zu-Chang;  Cheng, Yue-Hong;  Wang, Wei-Hua;  Li, De -Zhu
Adobe PDF(2540Kb)  |  收藏  |  浏览/下载：5/2  |  提交时间：2024/04/30
Borinda  Fargesia  infloresence  reproductive characters  Yushania  REVISION  
Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae 期刊论文
ANNALS OF BOTANY, 2022
作者:  Zhao, Lei;  Yang, Ying-Ying;  Qu, Xiao-Jian;  Ma, Hong;  Hu, Yi;  Li, Hong-Tao;  Yi, Ting-Shuang;  Li, De-Zhu
Adobe PDF(1678Kb)  |  收藏  |  浏览/下载：8/1  |  提交时间：2024/04/30
Araceae  diversification  phylogenomics  WGDs  adaptation  TRAIT-DEPENDENT SPECIATION  GENE DUPLICATION  ANGIOSPERM DIVERSIFICATION  PHYLOGENOMIC ANALYSES  NUCLEAR GENES  POLYPLOIDY  EVOLUTIONARY  FAMILY  RATES  TOOL  
Correlation Analysis Reveals an Important Role of GC Content in Accumulation of Deletion Mutations in the Coding Region of Angiosperm Plastomes 期刊论文
JOURNAL OF MOLECULAR EVOLUTION, 2021, 卷号: 89, 期号: 1-2, 页码: 73-80
作者:  Yu,Ying;  Li,Hong-Tao;  Wu,Yu-Huan;  Li,De-Zhu
收藏  |  浏览/下载：46/0  |  提交时间：2022/04/02
Base composition variation  AT-biased deletion mutation  Phylogenetic relatedness  Functional constraints  Energy  resource competition  Rrphylo  BIASED GENE CONVERSION  EVOLUTIONARY RATE VARIATION  BASE COMPOSITION  PLASTID GENOMES  PHYLOGENETIC SIGNAL  MISMATCH REPAIR  SELECTION  SLIPPAGE  PLANTS  RATES  
Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1183-1197
作者:  Ye,Xia-Ying;  Ma,Peng-Fei;  Guo,Cen;  Li,De-Zhu
收藏  |  浏览/下载：62/0  |  提交时间：2022/04/02
plastome  ddRAD  Fargesia  phylogenetic incongruence  reticulate evolution  Yushania  CONFLICTING GENE TREES  BAMBOOS POACEAE  ARUNDINARIEAE POACEAE  PHYLOGENETIC-RELATIONSHIPS  MORPHOLOGICAL EVOLUTION  BALANCING SELECTION  THAMNOCALAMUS GROUP  ALLIES GRAMINEAE  RADSEQ DATA  GBSSI GENE  
Two new species of Yushania (Poaceae: Bambusoideae) from South China, with a taxonomic revision of related species 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 6, 页码: 492-501
作者:  Ye,Xia-Ying;  Zhang,Yu-Xiao;  Li,De-Zhu
收藏  |  浏览/下载：71/0  |  提交时间：2022/04/02
Arundinarieae  Yushania  Hunan  New species  Taxonomy  YUNNAN  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：146/71  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 756-773
作者:  Guo,Cen;  Ma,Peng-Fei;  Yang,Guo-Qian;  Ye,Xia-Ying;  Guo,Ying;  Liu,Jing-Xia;  Liu,Yun-Long;  Eaton,Deren A. R.;  Guo,Zhen-Hua;  Li,De-Zhu
收藏  |  浏览/下载：91/0  |  提交时间：2022/04/02
Arundinarieae  ddRAD  paleopolyploid  genome skimming  rapid diversification  incongruence  ARUNDINARIEAE POACEAE BAMBUSOIDEAE  SOUTH CHINA SEA  WOODY BAMBOOS  PHYLOGENOMIC ANALYSES  ADAPTIVE RADIATION  ECOLOGICAL OPPORTUNITY  PLANT DIVERSIFICATION  ASIAN MONSOON  RADSEQ DATA  GENE TREES  
Development of 32 novel microsatellite loci in Juglans sigillata using genomic data 期刊论文
APPLICATIONS IN PLANT SCIENCES, 2020
作者:  Xu, Zu-Chang;  Jin, Ye-Chuan;  Milne, Richard, I;  Xiahou, Zuo-Ying;  Qin, Han-Tao;  Ye, Lin-Jiang;  Gao, Lian-Ming;  Liu, Jie;  Li, De-Zhu
浏览  |  Adobe PDF(310Kb)  |  收藏  |  浏览/下载：141/36  |  提交时间：2021/01/05