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Gradual genome size evolution and polyploidy in Allium from the Qinghai-Tibetan Plateau 期刊论文
ANNALS OF BOTANY, 2021
Authors:  Wang,Guangyan;  Zhou,Ning;  Chen,Qian;  Yang,Ya;  Yang,Yongping;  Duan,Yuanwen
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Genome size evolution  polyploidy  adaptation  ecological factors  seed mass  Allium  Qinghai-Tibetan Plateau  NUCLEAR-DNA CONTENT  CONSTRAINT HYPOTHESIS  FLOW-CYTOMETRY  PLANT TRAITS  C-VALUE  MECHANISMS  ASTERACEAE  PHYLOGENY  AMARYLLIDACEAE  INFORMATION  
Phylogenetic patterns suggest frequent multiple origins of secondary metabolites across the seed-plant 'tree of life' 期刊论文
NATIONAL SCIENCE REVIEW, 2021, 卷号: 8, 期号: 4, 页码: nwaa105
Authors:  Zhang,Yongzeng;  Deng,Tao;  Sun,Lu;  Landis,Jacob B.;  Moore,Michael J.;  Wang,Hengchang;  Wang,Yuehua;  Hao,Xiaojiang;  Chen,Jijun;  Li,Shenghong;  Xu,Maonian;  Puno,Pema-Tenzin;  Raven,Peter H.;  Sun,Hang
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secondary metabolites  phylogenetic tree  phylogenetic signal  co-diversification  evolution  bioprospecting  seed plants  DIVERSIFICATION  EVOLUTION  DIVERSITY  SIGNAL  ANGIOSPERMS  CHEMISTRY  DEFENSES  FOSSIL  KEYS  
Correlation Analysis Reveals an Important Role of GC Content in Accumulation of Deletion Mutations in the Coding Region of Angiosperm Plastomes 期刊论文
JOURNAL OF MOLECULAR EVOLUTION, 2021, 卷号: 89, 期号: 1-2, 页码: 73-80
Authors:  Yu,Ying;  Li,Hong-Tao;  Wu,Yu-Huan;  Li,De-Zhu
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Base composition variation  AT-biased deletion mutation  Phylogenetic relatedness  Functional constraints  Energy  resource competition  Rrphylo  BIASED GENE CONVERSION  EVOLUTIONARY RATE VARIATION  BASE COMPOSITION  PLASTID GENOMES  PHYLOGENETIC SIGNAL  MISMATCH REPAIR  SELECTION  SLIPPAGE  PLANTS  RATES  
Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1183-1197
Authors:  Ye,Xia-Ying;  Ma,Peng-Fei;  Guo,Cen;  Li,De-Zhu
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plastome  ddRAD  Fargesia  phylogenetic incongruence  reticulate evolution  Yushania  CONFLICTING GENE TREES  BAMBOOS POACEAE  ARUNDINARIEAE POACEAE  PHYLOGENETIC-RELATIONSHIPS  MORPHOLOGICAL EVOLUTION  BALANCING SELECTION  THAMNOCALAMUS GROUP  ALLIES GRAMINEAE  RADSEQ DATA  GBSSI GENE  
Evolutionary and ecological factors structure a plant-bumblebee network in a biodiversity hotspot, the Himalaya-Hengduan Mountains 期刊论文
FUNCTIONAL ECOLOGY, 2021, 卷号: 35, 期号: 11, 页码: 2523-2535
Authors:  Liang,Huan;  Zhao,Yan-Hui;  Rafferty,Nicole E.;  Ren,Zong-Xin;  Zhong,Li;  Li,Hai-Dong;  Li,De-Zhu;  Wang,Hong
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bumblebees  functional traits  Himalaya-Hengduan Mountains  phylogenetic signal  plant- pollinator interactions  trait matching  ANIMAL MUTUALISTIC NETWORKS  POLLINATOR INTERACTIONS  PHYLOGENETIC SIGNAL  FLOWER CHOICE  TRAITS  PROBOSCIS  BEES  SPECIALIZATION  ENVIRONMENT  4TH-CORNER  
Phylogeny of the Styracaceae Revisited Based on Whole Plastome Sequences, Including Novel Plastome Data from Parastyrax 期刊论文
SYSTEMATIC BOTANY, 2021, 卷号: 46, 期号: 1, 页码: 162-174
Authors:  Yan,Ming-Hui;  Li,Chun-Yang;  Fritsch,Peter W.;  Cai,Jie;  Wang,Heng-Chang
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Morphological and molecular evidence  non-coding regions  Parastyrax lacei  systematics  COMPARATIVE CHLOROPLAST GENOMICS  MOLECULAR EVOLUTION  DNA  FAMILY  BIOGEOGRAPHY  ASTERACEAE  CONFLICT  ERICALES  REVEALS  POACEAE  
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 163, 页码: 107232
Authors:  Yang,Ying-Ying;  Qu,Xiao-Jian;  Zhang,Rong;  Stull,Gregory W.;  Yi,Ting-Shuang
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Betulaceae  Juglandaceae  Myricaceae  Quercus  Phylogenetics  Chloroplast capture  RESTRICTION SITE VARIATION  INTERSPECIFIC GENE FLOW  DNA-SEQUENCES  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  CLADISTIC-ANALYSIS  SEED PLANTS  NUCLEAR  BETULACEAE  DIVERSIFICATION  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
Authors:  Gregory W. Stull
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Genomic insights into adaptation to heterogeneous environments for the ancient relictualCircaeaster agrestis(Circaeasteraceae, Ranunculales) 期刊论文
NEW PHYTOLOGIST, 2020
Authors:  Zhang, Xu;  Sun, Yanxia;  Landis, Jacob B.;  Zhang, Jianwen;  Yang, Linsen;  Lin, Nan;  Zhang, Huajie;  Guo, Rui;  Li, Lijuan;  Zhang, Yonghong;  Deng, Tao;  Sun, Hang;  Wang, Hengchang
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SMRT- and Illumina-based RNA-seq analyses unveil the ginsinoside biosynthesis and transcriptomic complexity in Panax notoginseng 期刊论文
SCIENTIFIC REPORTS, 2020
Authors:  Zhang, Dan;  Li, Wei;  Chen, Zhong-jian;  Wei, Fu-gang;  Liu, Yun-long;  Gao, Li-zhi
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