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Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
作者:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
Adobe PDF(2234Kb)  |  收藏  |  浏览/下载：3/0  |  提交时间：2024/05/09
Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Variation in gene expression along an elevation gradient of Rhododendron sanguineum var. haemaleum assessed in a comparative transcriptomic analysis 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1133065
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Liu,Jie;  Li,De-Zhu;  Gao,Lian-Ming
Adobe PDF(4904Kb)  |  收藏  |  浏览/下载：4/0  |  提交时间：2024/05/09
Rhododendron  elevational gradients  evolutionary adaptation  RNA-seq  organ-specific profile  alpine ecosystem  YOUNG LEAVES  ADAPTATION  ANTHOCYANINS  BIOSYNTHESIS  GENERATION  DIVERSITY  ALIGNMENT  ALTITUDE  PHOTOSYNTHESIS  REPRODUCTION  
Epigenetic regulation of seed-specific gene expression by DNA methylation valleys in castor bean 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1, 页码: 57
作者:  Han, Bing;  Wu, Di;  Zhang, Yanyu;  Li, De-Zhu;  Xu, Wei;  Liu, Aizhong
Adobe PDF(7527Kb)  |  收藏  |  浏览/下载：8/1  |  提交时间：2024/04/30
Seed-specific genes  DNA methylation valleys  Histone modifications  Enhancer  Castor bean  RICINUS-COMMUNIS L.  CENTRAL CELL  ARABIDOPSIS  EMBRYOGENESIS  TRANSCRIPTION  ENDOSPERM  IDENTIFICATION  ACCUMULATION  PLANTS  OIL  
Development of the petaloid bracts of a paleoherb species, Saururus chinensis 期刊论文
PLOS ONE, 2021, 卷号: 16, 期号: 9, 页码: e0255679
作者:  Zhao,Yin-He;  Zhang,Xue-Mei;  Li,De-Zhu
收藏  |  浏览/下载：65/0  |  提交时间：2022/04/02
GENE-EXPRESSION  ORGAN IDENTITY  FLORAL ORGAN  EVOLUTION  FLOWER  LEAVES  APETALA3  CORNALES  DAVIDIA  TOOL  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：146/71  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 204
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Wang,Yue-Hua;  Liu,Jie;  Zhu,An-Dan;  Hu,Jin-Yong;  Li,De-Zhu;  Gao,Lian-Ming
Adobe PDF(1937Kb)  |  收藏  |  浏览/下载：215/120  |  提交时间：2022/04/02
Anthocyanin synthesis  Comparative transcriptomics  Flower coloration  Gene expression  Rhododendron sanguineum complex  Sympatric speciation  RNA-SEQ DATA  TRANSCRIPTOME ANALYSIS  ANALYSIS REVEALS  BIOSYNTHESIS  GENERATION  ALIGNMENT  FLAVONOL  COPIGMENTATION  IDENTIFICATION  ACCUMULATION  
Organelle Genomes and Transcriptomes of Nymphaea Reveal the Interplay between Intron Splicing and RNA Editing 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 卷号: 22, 期号: 18, 页码: 9842
作者:  He,Zheng-Shan;  Zhu,Andan;  Yang,Jun-Bo;  Fan,Weishu;  Li,De-Zhu
收藏  |  浏览/下载：64/0  |  提交时间：2022/04/02
Nymphaea  organelle genomes  transcriptomes  intron splicing  RNA editing  MESSENGER-RNA  PLANT-MITOCHONDRIA  WHEAT  CHLOROPLASTS  ACCURATE  SITES  EXPRESSION  EVOLUTION  ALIGNMENT  PROTEINS  
Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 756-773
作者:  Guo,Cen;  Ma,Peng-Fei;  Yang,Guo-Qian;  Ye,Xia-Ying;  Guo,Ying;  Liu,Jing-Xia;  Liu,Yun-Long;  Eaton,Deren A. R.;  Guo,Zhen-Hua;  Li,De-Zhu
收藏  |  浏览/下载：91/0  |  提交时间：2022/04/02
Arundinarieae  ddRAD  paleopolyploid  genome skimming  rapid diversification  incongruence  ARUNDINARIEAE POACEAE BAMBUSOIDEAE  SOUTH CHINA SEA  WOODY BAMBOOS  PHYLOGENOMIC ANALYSES  ADAPTIVE RADIATION  ECOLOGICAL OPPORTUNITY  PLANT DIVERSIFICATION  ASIAN MONSOON  RADSEQ DATA  GENE TREES  
The Genomic Selfing Syndrome Accompanies the Evolutionary Breakdown of Heterostyly 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 1, 页码: 168-180
作者:  Wang,Xin-Jia;  Barrett,Spencer C. H.;  Zhong,Li;  Wu,Zhi-Kun;  Li,De-Zhu;  Wang,Hong;  Zhou,Wei
Adobe PDF(453Kb)  |  收藏  |  浏览/下载：71/23  |  提交时间：2022/04/02
deleterious mutations  effective population size  mating system  Primula  selection efficacy  ADAPTIVE MOLECULAR EVOLUTION  MATING SYSTEM  BREEDING SYSTEMS  DELETERIOUS MUTATIONS  PURIFYING SELECTION  POPULATION-SIZE  LINKAGE DISEQUILIBRIUM  INBREEDING DEPRESSION  PHYLOGENETIC ANALYSES  BACKGROUND SELECTION  
Plastid NDH Pseudogenization and Gene Loss in a Recently Derived Lineage from the Largest Hemiparasitic Plant Genus Pedicularis (Orobanchaceae ) 期刊论文
PLANT AND CELL PHYSIOLOGY, 2021, 卷号: 62, 期号: 6, 页码: 971-984
作者:  Li,Xin;  Yang,Jun-Bo;  Wang,Hong;  Song,Yu;  Corlett,Richard T.;  Yao,Xin;  Li,De-Zhu;  Yu,Wen-Bin
Adobe PDF(1695Kb)  |  收藏  |  浏览/下载：85/32  |  提交时间：2022/04/02
Hemiparasite  IR expansion  NA(D)H dehydrogenase-like complex  Orobanchaceae  Pseudogenization  Relaxation of selection  ACETYL-COA CARBOXYLASE  INVERTED REPEAT  LIFE-STYLE  ACCD GENE  EVOLUTION  GENOME  DIVERSITY  PHYLOGENY  SELECTION  INSIGHTS