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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：313/111  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：393/75  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Genomic analysis reveals rich genetic variation and potential targets of selection during domestication of castor bean from perennial woody tree to annual semi-woody crop 期刊论文
PLANT DIRECT, 2019, 卷号: 3, 期号: 10, 页码: 16
作者:  Xu, Wei;  Yang, Tianquan;  Qiu, Lijun;  Chapman, Mark A.;  Li, De-Zhu;  Liu, Aizhong
浏览  |  Adobe PDF(4201Kb)  |  收藏  |  浏览/下载：176/20  |  提交时间：2020/03/24
castor bean  domestication selection  genetic variation  seed storage lipids  woody tree  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：381/64  |  提交时间：2019/07/29
Transcriptome analysis reveals crucial genes involved in the biosynthesis of nervonic acid in woody Malania oleifera oilseeds 期刊论文
BMC PLANT BIOLOGY, 2018, 卷号: 18, 页码: 13
作者:  Yang, Tianquan;  Yu, Qian;  Xu, Wei;  Li, De-zhu;  Chen, Fu;  Liu, Aizhong
Adobe PDF(3716Kb)  |  收藏  |  浏览/下载：472/56  |  提交时间：2018/11/09
Nervonic Acids  Malania Oleifera  Transcriptome  Oilseed  Gene Expression  Oil Biosynthesis  
Differential expression networks and inheritance patterns of long non-coding RNAs in castor bean seeds 期刊论文
PLANT JOURNAL, 2018, 卷号: 95, 期号: 2, 页码: 324-340
作者:  Xu, Wei;  Yang, Tianquan;  Wang, Bin;  Han, Bing;  Zhou, Huangkai;  Wang, Yue;  Li, De-Zhu;  Liu, Aizhong
Adobe PDF(2286Kb)  |  收藏  |  浏览/下载：150/42  |  提交时间：2019/03/29
Phylogenomic analyses of large-scale nuclear genes provide new insights into the evolutionary relationships within the rosids 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2016, 卷号: 105, 期号: 1, 页码: 166-176
作者:  Zhao, Lei;  Li, Xia;  Zhang, Ning;  Zhang, Shu-Dong;  Yi, Ting-Shuang;  Ma, Hong;  Guo, Zhen-Hua;  Li, De-Zhu
Adobe PDF(2059Kb)  |  收藏  |  浏览/下载：380/73  |  提交时间：2016/12/21
Coalescence  Rosids Phylogenomics  Nuclear Genes  Gene Tree  Species Tree  
Telling plant species apart with DNA: from barcodes to genomes 期刊论文
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2016, 卷号: 371, 期号: 1702
作者:  Hollingsworth, Peter M.;  Li, De-Zhu;  van der Bank, Michelle;  Twyford, Alex D.
Adobe PDF(904Kb)  |  收藏  |  浏览/下载：254/101  |  提交时间：2016/11/04
Plant Dna Barcoding  Next-generation Sequencing  Genome Skimming  Species Discrimination  Hybrid Baits  
Genomic DNA Methylation Analyses Reveal the Distinct Profiles in Castor Bean Seeds with Persistent Endosperms 期刊论文
PLANT PHYSIOLOGY, 2016, 卷号: 171, 期号: 2, 页码: 1242-1258
作者:  Xu, Wei;  Yang, Tianquan;  Dong, Xue;  Li, De-Zhu;  Liu, Aizhong
Adobe PDF(2909Kb)  |  收藏  |  浏览/下载：319/68  |  提交时间：2016/10/19
Phylogenomic Analyses of Nuclear Genes Reveal the Evolutionary Relationships within the BEP Clade and the Evidence of Positive Selection in Poaceae 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 5, 页码: e64642
作者:  Zhao, Lei;  Zhang, Ning;  Ma, Peng-Fei;  Liu, Qi;  Li, De-Zhu;  Guo, Zhen-Hua
Adobe PDF(1078Kb)  |  收藏  |  浏览/下载：880/248  |  提交时间：2013/07/24
Rna-recognition Motif  Translation Initiation-factor  Multiple Sequence Alignment  Protein-coding Sequences  Likelihood Ratio Tests  Grass Family Poaceae  Arabidopsis-thaliana  Adaptive Evolution  Molecular Evolution  Plant Phylogenetics