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Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
作者:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
浏览  |  Adobe PDF(2234Kb)  |  收藏  |  浏览/下载：32/5  |  提交时间：2024/05/09
Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
作者:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
浏览  |  Adobe PDF(6416Kb)  |  收藏  |  浏览/下载：29/6  |  提交时间：2024/05/09
East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Epigenetic regulation of seed-specific gene expression by DNA methylation valleys in castor bean 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1, 页码: 57
作者:  Han, Bing;  Wu, Di;  Zhang, Yanyu;  Li, De-Zhu;  Xu, Wei;  Liu, Aizhong
浏览  |  Adobe PDF(7527Kb)  |  收藏  |  浏览/下载：31/5  |  提交时间：2024/04/30
Seed-specific genes  DNA methylation valleys  Histone modifications  Enhancer  Castor bean  RICINUS-COMMUNIS L.  CENTRAL CELL  ARABIDOPSIS  EMBRYOGENESIS  TRANSCRIPTION  ENDOSPERM  IDENTIFICATION  ACCUMULATION  PLANTS  OIL  
Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
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DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
Testing genome skimming for species discrimination in the large and taxonomically difficult genus Rhododendron 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2022, 卷号: 22, 期号: 1, 页码: 404-414
作者:  Fu,Chao-Nan;  Mo,Zhi-Qiong;  Yang,Jun-Bo;  Cai,Jie;  Ye,Lin-Jiang;  Zou,Jia-Yun;  Qin,Han-Tao;  Zheng,Wei;  Hollingsworth,Peter M.;  Li,De-Zhu;  Gao,Lian-Ming
浏览  |  Adobe PDF(447Kb)  |  收藏  |  浏览/下载：110/9  |  提交时间：2022/04/02
Himalaya-Hengduan Mountains  infrageneric phylogenetic resolution  next generation DNA barcoding  Rhododendron  species discrimination  PHYLOGENETIC-RELATIONSHIPS  SECTIONAL RELATIONSHIPS  CHLOROPLAST GENOME  DNA BARCODES  ERICACEAE  HYBRIDIZATION  YUNNAN  DIVERSITY  PATTERNS  AGASTUM  
Comparative plastomic analysis and insights into the phylogeny of Salvia (Lamiaceae) 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 15-26
作者:  Wu,Hong;  Ma,Peng-Fei;  Li,Hong-Tao;  Hu,Guo-Xiong;  Li,De-Zhu
收藏  |  浏览/下载：79/0  |  提交时间：2022/04/02
Lamiaceae  Salvia subg. Glutinaria  Plastome  Phylogeny  COMPLETE CHLOROPLAST GENOME  ANCHORED HYBRID ENRICHMENT  SUBGENUS CALOSPHACE  STAMINAL EVOLUTION  SEQUENCE  DNA  MECHANISM  RADIATION  INFERENCE  SELECTION  
Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 16, 页码: 10794-10812
作者:  Wambulwa,Moses C.;  Milne,Richard;  Wu,Zeng-Yuan;  Spicer,Robert A.;  Provan,Jim;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Wang,Wan-Ting;  Wang,Hong;  Gao,Lian-Ming;  Li,De-Zhu;  Liu,Jie
浏览  |  Adobe PDF(2089Kb)  |  收藏  |  浏览/下载：188/62  |  提交时间：2022/04/02
biodiversity hotspot  climate change  elevational gradient  Himalayan flora  mountain ecosystem  spatiotemporal diversification  SPECIES RICHNESS PATTERNS  QINGHAI-TIBET PLATEAU  SOUTH ASIAN MONSOON  ELEVATIONAL GRADIENT  HENGDUAN MOUNTAINS  CLIMATE-CHANGE  BETA-DIVERSITY  QUATERNARY GLACIATION  GENETIC CONSEQUENCES  ARTIFICIAL DISPERSAL  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：159/73  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Rose without prickle: genomic insights linked to moisture adaptation 期刊论文
NATIONAL SCIENCE REVIEW, 2021, 卷号: 8, 期号: 12, 页码: nwab092
作者:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Yang,Guo-Qian;  Cui,Wei-Hua;  Suo,Zhi-Quan;  Wang,Wei-Jia;  Sun,Yi-Bo;  Wang,Dan;  Cheng,Xin-Chao;  Li,Xu-Ming;  Dong,Xue;  Tang,Kai-Xue;  Li,De-Zhu;  Hu,Jin-Yong
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Rosa wichuraiana 'Basye's Thornless'  prickle-free  water storage  gene-regulatory-network (GRN)  QTL  TRICHOME DEVELOPMENT  PROVIDES INSIGHTS  FLOWERING TIME  TRANSCRIPTION  ARABIDOPSIS  INHERITANCE  EXPRESSION  INITIATION  TRAITS  GENE  
Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 204
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Wang,Yue-Hua;  Liu,Jie;  Zhu,An-Dan;  Hu,Jin-Yong;  Li,De-Zhu;  Gao,Lian-Ming
浏览  |  Adobe PDF(1937Kb)  |  收藏  |  浏览/下载：234/123  |  提交时间：2022/04/02
Anthocyanin synthesis  Comparative transcriptomics  Flower coloration  Gene expression  Rhododendron sanguineum complex  Sympatric speciation  RNA-SEQ DATA  TRANSCRIPTOME ANALYSIS  ANALYSIS REVEALS  BIOSYNTHESIS  GENERATION  ALIGNMENT  FLAVONOL  COPIGMENTATION  IDENTIFICATION  ACCUMULATION