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Habitat-related plastome evolution in the mycoheterotrophic Neottia listeroides complex (Orchidaceae, Neottieae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 282
作者:  Shao,Bing-Yi;  Wang,Mo-Zhu;  Chen,Si-Si;  Ya,Ji-Dong;  Jin,Xiao-Hua
浏览  |  Adobe PDF(3432Kb)  |  收藏  |  浏览/下载：189/40  |  提交时间：2024/05/09
Mycoheterotrophy  Neottia listeroides complex  Chloroplast genomes  Micro-evolution  MULTIPLE SEQUENCE ALIGNMENT  SYMBIOTIC GERMINATION  PHYLOGENETIC ANALYSIS  SPECIES ORCHIDACEAE  EPIDENDROIDEAE  GENOME  GASTRODIEAE  REDUCTION  PLANTS  PHOTOSYNTHESIS  
Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
作者:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
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Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
浏览  |  Adobe PDF(854Kb)  |  收藏  |  浏览/下载：155/33  |  提交时间：2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
作者:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
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Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES  
Comparative analyses of chloroplast genomes from Six Rhodiola species: variable DNA markers identification and phylogenetic relationships within the genus 期刊论文
BMC GENOMICS, 2022, 卷号: 23, 期号: 1, 页码: 577
作者:  Zhao, Kaihui;  Li, Lianqiang;  Quan, Hong;  Yang, Junbo;  Zhang, Zhirong;  Liao, Zhihua;  Lan, Xiaozhong
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Rhodiola  Chloroplast genome  Divergent hotspots  Phylogenetic analysis  GROUP CLASSIFICATION  FLOWERING PLANTS  PLASTID GENOMES  TRNH-PSBA  SEQUENCE  EVOLUTION  FAMILIES  REPEATS  UPDATE  ORDERS  
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 3, 页码: 219-227
作者:  Zhang, Ting;  Zeng, Chun-Xia;  Yang, Jun-Bo;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1664Kb)  |  收藏  |  浏览/下载：455/144  |  提交时间：2017/01/05
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Nuclear Ribosomal Dna  Universal Primer Pairs  
Indole Alkaloids with New Skeleton Activating Neural Stem Cells 期刊论文
ORGANIC LETTERS, 2014, 卷号: 16, 期号: 21, 页码: 5808-5811
作者:  Yang, Xing-Wei;  Yang, Cui-Ping;  Jiang, Li-Ping;  Qin, Xu-Jie;  Liu, Ya-Ping;  Shen, Qiu-Shuo;  Chen, Yong-Bin;  Luo, Xiao-Dong
浏览  |  Adobe PDF(312Kb)  |  收藏  |  浏览/下载：693/128  |  提交时间：2015/01/20
Enigmatic Relationships  Bayesian Phylogenetics  Evolutionary History  C-4 Photosynthesis  Plastid Genomes  Grasses Poaceae  Tree Selection  Woody Bamboos  Mixed Models  Nuclear Loci  Branch Length  Chloroplast Phylogenomics  Data Partitioning  Low Sequence Divergence  Sampling  Temperate Woody Bamboos  
Genetic diversity and structure of Munronia delavayi Franch. (Meliaceae), an endemic species in the dry-hot valley of Jinsha River, south-western China 期刊论文
GENETIC RESOURCES AND CROP EVOLUTION, 2014, 卷号: 61, 期号: 7, 页码: 1381-1395
作者:  Jia, Jing;  Wu, Hao;  Wang, Jin-Feng;  Gong, Xun
浏览  |  Adobe PDF(795Kb)  |  收藏  |  浏览/下载：444/114  |  提交时间：2014/11/25
Conservation Genetics  Dry-hot Valley  Hydropower Stations  Munronia Delavayi  Mitochondrial  Chloroplast And Nuclear Genomes  
Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2014, 卷号: 14, 期号: 5, 页码: 1024-1031
作者:  Yang, Jun-Bo;  Li, De-Zhu;  Li, Hong-Tao;  Li, DZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Peoples R China.;  dzl@mail.kib.ac.cn;  lihongtao@mail.kib.ac.cn
浏览  |  Adobe PDF(182Kb)  |  收藏  |  浏览/下载：776/316  |  提交时间：2014/10/11
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Novel Universal Primer Pairs  Phylogenomics  Species Identification