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Draft genomes of two outcrossing wild rice,Oryza rufipogonandO. longistaminata, reveal genomic features associated with mating-system evolution 期刊论文
PLANT DIRECT, 2020
作者:  Li, Wei;  Zhang, Qun-Jie;  Zhu, Ting;  Tong, Yan;  Li, Kui;  Shi, Cong;  Zhang, Yun;  Liu, Yun-Long;  Jiang, Jian-Jun;  Liu, Yuan;  Xia, En-Hua;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Dan;  Shi, Chao;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Jiao, Jun-ying;  Xu, Ping-Zhen;  Yang, Li-Li;  Gao, Li-Zhi
浏览  |  Adobe PDF(2847Kb)  |  收藏  |  浏览/下载：149/44  |  提交时间：2021/01/05
Improved hybrid de novo genome assembly and annotation of African wild rice, Oryza longistaminata, from Illumina and PacBio sequencing reads 期刊论文
PLANT GENOME, 2020
作者:  Li, Wei;  Li, Kui;  Zhang, Qun-jie;  Zhu, Ting;  Zhang, Yun;  Shi, Cong;  Liu, Yun-long;  Xia, En-hua;  Jiang, Jian-jun;  Shi, Chao;  Zhang, Li-ping;  Huang, Hui;  Tong, Yan;  Liu, Yuan;  Zhang, Dan;  Zhao, Yuan;  Jiang, Wen-kai;  Zhao, You-jie;  Mao, Shu-yan;  Jiao, Jun-ying;  Xu, Ping-zhen;  Yang, Li-li;  Yin, Guo-ying;  Gao, Li-zhi
浏览  |  Adobe PDF(2580Kb)  |  收藏  |  浏览/下载：172/67  |  提交时间：2021/01/05
The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis 期刊论文
MOLECULAR PLANT, 2017, 卷号: 10, 页码: 866-877
作者:  Xia, En-Hua;  Zhang, Hai-Bin;  Sheng, Jun;  Li, Kui;  Zhang, Qun-Jie;  Kim, Changhoon;  Zhang, Yun;  Liu, Yuan;  Zhu, Ting;  Li, Wei;  Huang, Hui;  Tong, Yan;  Nan, Hong;  Shi, Cong;  Shi, Chao;  Jiang, Jian-Jun;  Mao, Shu-Yan;  Jiao, Jun-Ying;  Zhang, Dan;  Zhao, Yuan;  Zhao, You-Jie;  Zhang, Li-Ping;  Liu, Yun-Long;  Liu, Ben-Ying;  Yu, Yue;  Shao, Sheng-Fu;  Ni, De-Jiang;  Eichler, Evan E.;  Gao, Li-Zhi
浏览  |  Adobe PDF(778Kb)  |  收藏  |  浏览/下载：568/196  |  提交时间：2017/07/18
Tea Tree Genome  Comparative Genomics  Tea Flavor  Tea-proccessing Suitability  Global Adaptation  Caffeine Biosynthesis  
The caterpillar fungus, Ophiocordyceps sinensis, genome provides insights into highland adaptation of fungal pathogenicity 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7, 页码: 1806
作者:  Xia, En-Hua;  Yang, Da-Rong;  Jiang, Jian-Jun;  Zhang, Qun-Jie;  Liu, Yuan;  Liu, Yun-Long;  Zhang, Yun;  Zhang, Hai-Bin;  Shi, Cong;  Tong, Yan;  Kim, Changhoon;  Chen, Hua;  Peng, Yan-Qiong;  Yu, Yue;  Zhang, Wei;  Eichler, Evan E.;  Gao, Li-Zhi
浏览  |  Adobe PDF(5215Kb)  |  收藏  |  浏览/下载：324/60  |  提交时间：2017/07/10
Full transcription of the chloroplast genome in photosynthetic eukaryotes 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  Shi, Chao;  Wang, Shuo;  Xia, En-Hua;  Jiang, Jian-Jun;  Zeng, Fan-Chun;  Gao, Li-Zhi
浏览  |  Adobe PDF(2371Kb)  |  收藏  |  浏览/下载：316/52  |  提交时间：2016/09/28
The complete mitochondrial genome of western painted turtle, Chrysemys picta bellii (Chrysemys, Emydidae) 期刊论文
MITOCHONDRIAL DNA, 2016, 卷号: 27, 期号: 2, 页码: 787-788
作者:  Jiang, Jian-Jun;  Xia, En-Hua;  Gao, Cheng-Wen;  Gao, Li-Zhi
浏览  |  Adobe PDF(180Kb)  |  收藏  |  浏览/下载：230/33  |  提交时间：2016/02/01
c  Picta Bellii  Genome  Mitochondrion  Western Painted Turtle  
CandiSSR: An Efficient Pipeline used for Identifying Candidate Polymorphic SSRs Based on Multiple Assembled Sequences 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 6
作者:  Xia, En-Hua;  Yao, Qiu-Yang;  Zhang, Hai-Bin;  Jiang, Jian-Jun;  Zhang, Li-Ping;  Gao, Li-Zhi
浏览  |  Adobe PDF(3466Kb)  |  收藏  |  浏览/下载：259/49  |  提交时间：2016/05/04
Microsatellites  Transferability  Polymorphic Ssr  Candissr  Multiple Assembled Genomes  Multiple Assembled Transcriptomes  
De novo transcriptome assembly of the wild relative of tea tree (Camellia taliensis) and comparative analysis with tea transcriptome identified putative genes associated with tea quality and stress response 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 页码: 298
作者:  Zhang, Hai-Bin;  Xia, En-Hua;  Huang, Hui;  Jiang, Jian-Jun;  Liu, Ben-Ying;  Gao, Li-Zhi;  Gao,LZ (reprint author),Chinese Acad Sci,Germplasm Bank Wild Species Southwest China,Kunming Inst Bot,Plant Germplasm & Genom Ctr,Kunming 650204,Peoples R China.;  Lgao@mail.kib.ac.cn
浏览  |  Adobe PDF(1163Kb)  |  收藏  |  浏览/下载：342/62  |  提交时间：2015/06/29
Rapid diversification of five Oryza AA genomes associated with rice adaptation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 卷号: 111, 期号: 46, 页码: E4954-E4962
作者:  Zhang, Qun-Jie;  Zhu, Ting;  Xia, En-Hua;  Shi, Chao;  Liu, Yun-Long;  Zhang, Yun;  Liu, Yuan;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Zhang, Li-Ping;  Huang, Hui;  Jiao, Jun-Ying;  Xu, Ping-Zhen;  Yao, Qiu-Yang;  Zeng, Fan-Chun;  Yang, Li-Li;  Gao, Ju;  Tao, Da-Yun;  Wang, Yue-Ju;  Bennetzen, Jeffrey L.;  Gao, Li-Zhi;  Bennetzen,JL (reprint author),Univ Georgia,Dept Genet,Athens,GA 30602 USA.;  maize@uga.edu;  lgao@mail.kib.ac.cn
浏览  |  Adobe PDF(1635Kb)  |  收藏  |  浏览/下载：464/86  |  提交时间：2015/01/20
Comparative Genomics  Full-genome Sequencing  Genomic Variation  Positive Selection  Oryza  
Transcriptome Analysis of the Oil-Rich Tea Plant, Camellia oleifera, Reveals Candidate Genes Related to Lipid Metabolism 期刊论文
PLOS ONE, 2014, 卷号: 9, 期号: 8, 页码: e104150
作者:  Xia, En-Hua;  Jiang, Jian-Jun;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Hai-Bin;  Gao, Li-Zhi;  Gao, LZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Plant Germplasm & Genom Ctr, Germplasm Bank Wild Species, Kunming, Peoples R China.;  Lgao@mail.kib.ac.cn
Adobe PDF(1788Kb)  |  收藏  |  浏览/下载：559/47  |  提交时间：2014/10/11
Multiple Sequence Alignment  High-throughput  Snp Discovery  Microsatellite Markers  Maximum-likelihood  Ssr-markers  Annotation  Generation  Protein  Database