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Plastid RNA editing reduction accompanied with genetic variations in Cymbidium, a genus with diverse lifestyle modes 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 3, 页码: 316-321
作者:  Zhe, Mengqing;  Zhang, Le;  Liu, Fang;  Huang, Yiwei;  Fan, Weishu;  Yang, Junbo;  Zhu, Andan
收藏  |  浏览/下载：221/0  |  提交时间：2022/07/15
RNA editing  Plastomes  ndh genes  Lifestyle  
Evolutionary patterns of chimeric retrogenes in Oryza species 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 12
作者:  Zhou, Yanli;  Zhang, Chengjun
浏览  |  Adobe PDF(2334Kb)  |  收藏  |  浏览/下载：171/51  |  提交时间：2020/03/02
Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
作者:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1214Kb)  |  收藏  |  浏览/下载：140/36  |  提交时间：2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：268/28  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：245/28  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
浏览  |  Adobe PDF(1636Kb)  |  收藏  |  浏览/下载：223/47  |  提交时间：2019/07/29
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 222, 期号: 2, 页码: 1061-1075
作者:  Mower, Jeffrey P.;  Ma, Peng-Fei;  Grewe, Felix;  Taylor, Alex;  Michael, Todd P.;  VanBuren, Robert;  Qiu, Yin-Long
浏览  |  Adobe PDF(767Kb)  |  收藏  |  浏览/下载：149/25  |  提交时间：2019/06/24
evolutionary stasis  gene loss  inversion  Isoetes (quillworts)  Lycopodiaceae (clubmosses)  Lycopodiophyta (lycophytes)  plastid genome (plastome)  Selaginella (spikemosses)  
Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 11
作者:  Fu, Chao-Nan;  Wu, Chung-Shien;  Ye, Lin-Jiang;  Mo, Zhi-Qiong;  Liu, Jie;  Chang, Yu-Wen;  Li, De-Zhu;  Chaw, Shu-Miaw;  Gao, Lian-Ming
Adobe PDF(3412Kb)  |  收藏  |  浏览/下载：358/102  |  提交时间：2019/03/25
Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2017, 卷号: 9, 期号: 9, 页码: 2354-2364
作者:  Song, Yu;  Yu, Wen-Bin;  Tan, Yunhong;  Liu, Bing;  Yao, Xin;  Jin, Jianjun;  Padmanaba, Michael;  Yang, Jun-Bo;  Corlett, Richard T.
Adobe PDF(1863Kb)  |  收藏  |  浏览/下载：210/57  |  提交时间：2017/10/23
Lauraceae  Chloroplast  Genome  Phylogenetic Relationship  Loss Event  
Chloroplast genome structure in Ilex (Aquifoliaceae) 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  Yao, Xin;  Tan, Yun-Hong;  Liu, Ying-Ying;  Song, Yu;  Yang, Jun-Bo;  Corlett, Richard T.
Adobe PDF(1461Kb)  |  收藏  |  浏览/下载：308/35  |  提交时间：2016/08/22