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Draft genomes of two outcrossing wild rice,Oryza rufipogonandO. longistaminata, reveal genomic features associated with mating-system evolution 期刊论文
PLANT DIRECT, 2020
作者:  Li, Wei;  Zhang, Qun-Jie;  Zhu, Ting;  Tong, Yan;  Li, Kui;  Shi, Cong;  Zhang, Yun;  Liu, Yun-Long;  Jiang, Jian-Jun;  Liu, Yuan;  Xia, En-Hua;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Dan;  Shi, Chao;  Jiang, Wen-Kai;  Zhao, You-Jie;  Mao, Shu-Yan;  Jiao, Jun-ying;  Xu, Ping-Zhen;  Yang, Li-Li;  Gao, Li-Zhi
Adobe PDF(2847Kb)  |  收藏  |  浏览/下载：110/39  |  提交时间：2021/01/05
Improved hybrid de novo genome assembly and annotation of African wild rice, Oryza longistaminata, from Illumina and PacBio sequencing reads 期刊论文
PLANT GENOME, 2020
作者:  Li, Wei;  Li, Kui;  Zhang, Qun-jie;  Zhu, Ting;  Zhang, Yun;  Shi, Cong;  Liu, Yun-long;  Xia, En-hua;  Jiang, Jian-jun;  Shi, Chao;  Zhang, Li-ping;  Huang, Hui;  Tong, Yan;  Liu, Yuan;  Zhang, Dan;  Zhao, Yuan;  Jiang, Wen-kai;  Zhao, You-jie;  Mao, Shu-yan;  Jiao, Jun-ying;  Xu, Ping-zhen;  Yang, Li-li;  Yin, Guo-ying;  Gao, Li-zhi
Adobe PDF(2580Kb)  |  收藏  |  浏览/下载：137/61  |  提交时间：2021/01/05
Rapid and Recent Evolution of LTR Retrotransposons Drives Rice Genome Evolution During the Speciation of AA-Genome Oryza Species 期刊论文
G3-GENES GENOMES GENETICS, 2017, 卷号: 7, 页码: 1875-1885
作者:  Zhang, Qun-Jie;  Gao, Li-Zhi
Adobe PDF(2083Kb)  |  收藏  |  浏览/下载：196/44  |  提交时间：2017/07/18
Ltr Retrotransposons  Oryza  Aa-genome  Rice Speciation  Comparative Genomics  
LTRtype, an Efficient Tool to Characterize Structurally Complex LTR Retrotransposons and Nested Insertions on Genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8, 页码: 1
作者:  Zeng, Fan-Chun;  Zhao, You-Jie;  Zhang, Que-Jie;  Gao, Li-Zhi
Adobe PDF(2129Kb)  |  收藏  |  浏览/下载：138/34  |  提交时间：2017/06/01
Ltrtype  Ltr Retrotransposons  Nested Insertions  Structural Complexity  Genome Evolution  
Transcriptome Analysis Identifies Candidate Genes Related to Triacylglycerol and Pigment Biosynthesis and Photoperiodic Flowering in the Ornamental and Oil-Producing Plant, Camellia reticulata (Theaceae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 7
作者:  Yao, Qiu-Yang;  Huang, Hui;  Tong, Yan;  Xia, En-Hua;  Gao, Li-Zhi
Adobe PDF(3239Kb)  |  收藏  |  浏览/下载：170/54  |  提交时间：2016/06/27
Camellia Reticulata  Transcriptome  Triacylglycerol Biosynthesis  Photoperiodic Flowering Pathway  Pigment Biosynthesis  Est-ssrs  
CandiSSR: An Efficient Pipeline used for Identifying Candidate Polymorphic SSRs Based on Multiple Assembled Sequences 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 6
作者:  Xia, En-Hua;  Yao, Qiu-Yang;  Zhang, Hai-Bin;  Jiang, Jian-Jun;  Zhang, Li-Ping;  Gao, Li-Zhi
Adobe PDF(3466Kb)  |  收藏  |  浏览/下载：240/46  |  提交时间：2016/05/04
Microsatellites  Transferability  Polymorphic Ssr  Candissr  Multiple Assembled Genomes  Multiple Assembled Transcriptomes  
The complete chloroplast genome of eggplant (Solanum melongena L.) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 卷号: 1, 页码: 843-844
作者:  Ding, Qing-Xia;  Liu, Jia;  Gao, Li-zhi
Adobe PDF(622Kb)  |  收藏  |  浏览/下载：140/52  |  提交时间：2017/07/10
Chloroplast Genome  Eggplant  Phylogenomic Analysis  Solanum Melongena  
De novo transcriptome assembly of the wild relative of tea tree (Camellia taliensis) and comparative analysis with tea transcriptome identified putative genes associated with tea quality and stress response 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 页码: 298
作者:  Zhang, Hai-Bin;  Xia, En-Hua;  Huang, Hui;  Jiang, Jian-Jun;  Liu, Ben-Ying;  Gao, Li-Zhi;  Gao,LZ (reprint author),Chinese Acad Sci,Germplasm Bank Wild Species Southwest China,Kunming Inst Bot,Plant Germplasm & Genom Ctr,Kunming 650204,Peoples R China.;  Lgao@mail.kib.ac.cn
Adobe PDF(1163Kb)  |  收藏  |  浏览/下载：324/60  |  提交时间：2015/06/29
Transcriptome Analysis of the Oil-Rich Tea Plant, Camellia oleifera, Reveals Candidate Genes Related to Lipid Metabolism 期刊论文
PLOS ONE, 2014, 卷号: 9, 期号: 8, 页码: e104150
作者:  Xia, En-Hua;  Jiang, Jian-Jun;  Huang, Hui;  Zhang, Li-Ping;  Zhang, Hai-Bin;  Gao, Li-Zhi;  Gao, LZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Plant Germplasm & Genom Ctr, Germplasm Bank Wild Species, Kunming, Peoples R China.;  Lgao@mail.kib.ac.cn
Adobe PDF(1788Kb)  |  收藏  |  浏览/下载：541/47  |  提交时间：2014/10/11
Multiple Sequence Alignment  High-throughput  Snp Discovery  Microsatellite Markers  Maximum-likelihood  Ssr-markers  Annotation  Generation  Protein  Database  
Prevalent Role of Gene Features in Determining Evolutionary Fates of Whole-Genome Duplication Duplicated Genes in Flowering Plants 期刊论文
PLANT PHYSIOLOGY, 2013, 卷号: 161, 期号: 4, 页码: 1844-1861
作者:  Jiang, Wen-kai;  Liu, Yun-long;  Xia, En-hua;  Gao, Li-zhi
Adobe PDF(983Kb)  |  收藏  |  浏览/下载：375/65  |  提交时间：2013/06/08
Arabidopsis-thaliana  Saccharomyces-cerevisiae  Phylogenetic Analysis  Cytosine Methylation  Dosage Sensitivity  Balance Hypothesis  Yeast Genome  Probe Level  Polyploidy  Duplicability