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The diversity of mycorrhiza-associated fungi and trees shapes subtropical mountain forest ecosystem functioning 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2023
作者:  Luo,Ya-Huang;  Ma,Liang-Liang;  Seibold,Sebastian;  Cadotte,Marc W. W.;  Burgess,Kevin S. S.;  Tan,Shao-Lin;  Ye,Lin-Jiang;  Zheng,Wei;  Zou,Jia-Yun;  Chen,Zhi-Fa;  Liu,De-Tuan;  Zhu,Guang-Fu;  Shi,Xiao-Chun;  Zhao,Wei;  Li,De-Zhu;  Liu,Jie;  Gao,Lian-Ming
浏览  |  Adobe PDF(20613Kb)  |  收藏  |  浏览/下载：10/4  |  提交时间：2024/07/10
above-ground carbon  arbuscular mycorrhiza  ectomycorrhiza  elevational gradients  functional diversity  soil organic carbon  NET PRIMARY PRODUCTIVITY  CARBON SEQUESTRATION  ABOVEGROUND BIOMASS  TROPICAL FORESTS  NITROGEN LIMITATION  BIODIVERSITY LOSS  SPECIES RICHNESS  PLANT DIVERSITY  ORGANIC-MATTER  SOIL  
Phylogenomic insights into the origin and evolutionary history of evergreen broadleaved forests in East Asia under Cenozoic climate change 期刊论文
MOLECULAR ECOLOGY, 2023, 卷号: 32, 期号: 11, 页码: 2850-2868
作者:  Qin,Sheng-Yuan;  Zuo,Zheng-Yu;  Guo,Cen;  Du,Xin-Yu;  Liu,Shui-Yin;  Yu,Xiang-Qin;  Xiang,Xiao-Guo;  Rong,Jun;  Liu,Bing;  Liu,Zhi-Fang;  Ma,Peng-Fei;  Li,De-Zhu
Adobe PDF(12802Kb)  |  收藏  |  浏览/下载：9/1  |  提交时间：2024/07/10
East Asian monsoon  evergreen broadleaved forests  genome resequencing  Lauraceae  Litsea complex  single-nucleotide variants  SOUTHERN CHINA EVIDENCE  NORTHERN-HEMISPHERE  MOLECULAR PHYLOGENY  SPECIES RICHNESS  LITSEA COMPLEX  R PACKAGE  LAURACEAE  EOCENE  TERTIARY  BIOGEOGRAPHY  
Continuous genetic adaptation to high elevations of alpine bamboos in the Hengduan Mountains, Southwest China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023
作者:  Luo,Li-Ying;  Jin,Gui-Hua;  Ma,Peng-Fei;  Li,De-Zhu
Adobe PDF(1348Kb)  |  收藏  |  浏览/下载：7/4  |  提交时间：2024/07/10
alpine bamboos  continuum evolution  Hengduan Mountains  high-elevation adaptation  transcriptome  HIGH-ALTITUDE ADAPTATION  PHYLOGENETIC ANALYSIS  EVOLUTION  DUPLICATIONS  GENERATION  POLYPLOIDY  SELECTION  
Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
作者:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
浏览  |  Adobe PDF(2234Kb)  |  收藏  |  浏览/下载：56/13  |  提交时间：2024/05/09
Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(3169Kb)  |  收藏  |  浏览/下载：43/8  |  提交时间：2024/04/30
DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
Six steps for building a technological knowledge base for future taxonomic work 期刊论文
NATIONAL SCIENCE REVIEW, 2022, 卷号: 9, 期号: 12, 页码: nwac284
作者:  Orr, Michael C.;  Feijo, Anderson;  Chesters, Douglas;  Vogler, Alfried P.;  Bossert, Silas;  Ferrari, Rafael R.;  Costello, Mark John;  Hughes, Alice C.;  Krogmann, Lars;  Ascher, John S.;  Zhou, Xin;  Li, De-Zhu;  Bai, Ming;  Chen, Jun;  Ge, Deyan;  Luo, Arong;  Qiao, Gexia;  Williams, Paul H.;  Zhang, Ai-bing;  Ma, Keping;  Zhang, Feng;  Zhu, Chao-Dong
Adobe PDF(392Kb)  |  收藏  |  浏览/下载：50/14  |  提交时间：2024/04/30
Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae 期刊论文
ANNALS OF BOTANY, 2022
作者:  Zhao, Lei;  Yang, Ying-Ying;  Qu, Xiao-Jian;  Ma, Hong;  Hu, Yi;  Li, Hong-Tao;  Yi, Ting-Shuang;  Li, De-Zhu
Adobe PDF(1678Kb)  |  收藏  |  浏览/下载：45/9  |  提交时间：2024/04/30
Araceae  diversification  phylogenomics  WGDs  adaptation  TRAIT-DEPENDENT SPECIATION  GENE DUPLICATION  ANGIOSPERM DIVERSIFICATION  PHYLOGENOMIC ANALYSES  NUCLEAR GENES  POLYPLOIDY  EVOLUTIONARY  FAMILY  RATES  TOOL  
Plastid phylogenomics shed light on intergeneric relationships and spatiotemporal evolutionary history of Melocanninae (Poaceae: Bambusoideae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 3, 页码: 640-652
作者:  Zhou, Meng-Yuan;  Liu, Jing-Xia;  Ma, Peng-Fei;  Yang, Jun-Bo;  Li, De-Zhu
Adobe PDF(3608Kb)  |  收藏  |  浏览/下载：78/5  |  提交时间：2024/03/11
Organelle Phylogenomics and Extensive Conflicting Phylogenetic Signals in the Monocot Order Poales 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12, 页码: 824672
作者:  Wu, Hong;  Yang, Jun-Bo;  Liu, Jing-Xia;  Li, De-Zhu;  Ma, Peng-Fei
浏览  |  Adobe PDF(6314Kb)  |  收藏  |  浏览/下载：4/3  |  提交时间：2024/08/21
Poales  phylogenomic conflict  plastome  mitochondrial  nuclear  EVOLUTIONARY SIGNIFICANCE  PLASTID GENOMES  NUCLEAR GENES  SEQUENCE DATA  TREE  MITOCHONDRIAL  DIVERSIFICATION  FAMILIES  RBCL  CLASSIFICATION  
New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
作者:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
收藏  |  浏览/下载：133/0  |  提交时间：2022/04/02
fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS