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中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
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Plastome phylogenomics and morphological traits analyses provide new insights into the phylogenetic position, species delimitation and speciation of Triplostegia (Caprifoliaceae)
期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 645
Authors:
Fu,Qing-Li
;
Mo,Zhi-Qiong
;
Xiang,Xiao-Guo
;
Milne,Richard I.
;
Jacquemyn,Hans
;
Burgess,Kevin S.
;
Sun,Ya-Nan
;
Yan,Hua
;
Qiu,Li
;
Yang,Bo-Yun
;
Tan,Shao-Lin
Adobe PDF(4052Kb)
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Submit date:2024/05/09
Plastid genome
Phylogenomics
Speciation
Species delimitation
Triplostegia
FOREST DYNAMICS PLOT
HENGDUAN MOUNTAINS
ELEVATIONAL GRADIENT
SYSTEMATIC POSITION
RIVERINE BARRIER
DNA BARCODES
PLANT
DIPSACALES
SEQUENCE
DIVERSITY
Bumblebees with big teeth: revising the subgenus Alpigenobombus with the good, the bad and the ugly of numts (Hymenoptera: Apidae)
期刊论文
EUROPEAN JOURNAL OF TAXONOMY, 2023, 卷号: 892, 页码: 1-65
Authors:
Williams,Paul H.
;
An,Jiandong
;
Dorji,Phurpa
;
Huang,Jiaxing
;
Jaffar,Saleem
;
Japoshvili,George
;
Narah,Jaya
;
Ren,Zongxin
;
Streinzer,Martin
;
Thanoosing,Chawatat
;
Tian,Li
;
Orr,Michael C.
Adobe PDF(5665Kb)
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Submit date:2024/07/30
Calibrated phylogeny
coalescent
integrative
robbing
taxonomy
MITOCHONDRIAL PSEUDOGENES
HISTORICAL BIOGEOGRAPHY
COMPREHENSIVE PHYLOGENY
SPECIES DELIMITATION
BARCODES HYMENOPTERA
BEES HYMENOPTERA
DNA BARCODES
BOMBUS
DIVERSITY
CLASSIFICATION
Plastome characteristics and species identification of Chinese medicinal wintergreens (Gaultheria, Ericaceae)
期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 6, 页码: 519-529
Authors:
Xu, Yan-Ling
;
Shen, Hao-Hua
;
Du, Xin-Yu
;
Lu, Lu
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Submit date:2024/04/30
DNA barcodes
Gene duplication
Plastome
Repeat sequences
Structural variation
CHLOROPLAST GENOME
PHYLOGENETIC ANALYSIS
INVERTED REPEAT
EVOLUTION
SEQUENCE
DNA
SOFTWARE
INSIGHTS
REARRANGEMENTS
ORGANIZATION
Testing genome skimming for species discrimination in the large and taxonomically difficult genus Rhododendron
期刊论文
MOLECULAR ECOLOGY RESOURCES, 2022, 卷号: 22, 期号: 1, 页码: 404-414
Authors:
Fu,Chao-Nan
;
Mo,Zhi-Qiong
;
Yang,Jun-Bo
;
Cai,Jie
;
Ye,Lin-Jiang
;
Zou,Jia-Yun
;
Qin,Han-Tao
;
Zheng,Wei
;
Hollingsworth,Peter M.
;
Li,De-Zhu
;
Gao,Lian-Ming
Adobe PDF(447Kb)
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Submit date:2022/04/02
Himalaya-Hengduan Mountains
infrageneric phylogenetic resolution
next generation DNA barcoding
Rhododendron
species discrimination
PHYLOGENETIC-RELATIONSHIPS
SECTIONAL RELATIONSHIPS
CHLOROPLAST GENOME
DNA BARCODES
ERICACEAE
HYBRIDIZATION
YUNNAN
DIVERSITY
PATTERNS
AGASTUM
Deciphering the Taxonomic Delimitation of Ottelia acuminata (Hydrocharitaceae) Using Complete Plastomes as Super-Barcodes
期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 681270
Authors:
Ji,Yunheng
;
Yang,Jin
;
Landis,Jacob B.
;
Wang,Shuying
;
Yang,Zhenyan
;
Zhang,Yonghong
Adobe PDF(2922Kb)
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Submit date:2022/04/02
species boundary
molecular identification
DNA barcoding
taxonomy
threatened species
aquatic plant
SPECIES DELIMITATION
DNA BARCODES
MACROPHYTE DECLINE
CONSERVATION
GENOMES
BIODIVERSITY
GENETICS
MODEL
LAKES
SPP.
Can plastid genome sequencing be used for species identification in Lauraceae?
期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 197, 期号: 1, 页码: 1-14
Authors:
Liu,Zhi-Fang
;
Ma,Hui
;
Ci,Xiu-Qin
;
Li,Lang
;
Song,Yu
;
Liu,Bing
;
Li,Hsi-Wen
;
Wang,Shu-Li
;
Qu,Xiao-Jian
;
Hu,Jian-Lin
;
Zhang,Xiao-Yan
;
Conran,John G.
;
Twyford,Alex D.
;
Yang,Jun-Bo
;
Hollingsworth,Peter M.
;
Li,Jie
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Submit date:2022/04/02
cytonuclear discordance
DNA barcoding
nrDNA
phylogenetics
plastomes
CHLOROPLAST GENOME
ALSEODAPHNOPSIS LAURACEAE
GENE ORGANIZATION
DNA BARCODES
NUCLEAR
EVOLUTION
ALIGNMENT
CLASSIFICATION
DISCORDANCE
CINNAMOMUM
Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae)
期刊论文
MOLECULAR ECOLOGY RESOURCES, 2019, 页码: 13
Authors:
Ji, Yunheng
;
Liu, Changkun
;
Yang, Zhenyan
;
Yang, Lifang
;
He, Zhengshan
;
Wang, Hengchang
;
Yang, Junbo
;
Yi, Tingshuang
Adobe PDF(836Kb)
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Submit date:2019/09/10
next-generation DNA barcodes
Panax
plastome
ribosomal DNA
species discrimination
standard DNA barcodes
Assessment of genetic variation among wild Alpinia nigra (Zingiberaceae) population: an approach based on molecular phylogeny
期刊论文
MOLECULAR BIOLOGY REPORTS, 2019, 卷号: 46, 期号: 1, 页码: 177-189
Authors:
Basak, Supriyo
;
Chakrabartty, Ishani
;
Hedaoo, Vivek
;
Shelke, Rahul G.
;
Rangan, Latha
Adobe PDF(2091Kb)
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Submit date:2019/07/29
Alpinia nigra
Genetic diversity
DNA barcodes
Habitat fragmentation
ISSR marker
Population differentiation
RAPD marker
Fungal Planet description sheets: 281-319
期刊论文
PERSOONIA, 2014, 卷号: 33, 页码: 212-292
Authors:
Crous, P. W.
;
Wingfield, M. J.
;
Schumacher, R. K.
;
Summerell, B. A.
;
Giraldo, A.
;
Gene, J.
;
Guarro, J.
;
Wanasinghe, D. N.
;
Hyde, K. D.
;
Camporesi, E.
;
Jones, E. B. Gareth
;
Thambugala, K. M.
;
Malysheva, E. F.
;
Malysheva, V. F.
;
Acharya, K.
;
Alvarez, J.
;
Alvarado, P.
;
Assefa, A.
;
Barnes, C. W.
;
Bartlett, J. S.
;
Blanchette, R. A.
;
Burgess, T. I.
;
Carlavilla, J. R.
;
Coetzee, M. P. A.
;
Damm, U.
;
Decock, C. A.
;
den Breeyen, A.
;
de Vries, B.
;
Dutta, A. K.
;
Holdom, D. G.
;
Rooney-Latham, S.
;
Manjon, J. L.
;
Marincowitz, S.
;
Mirabolfathy, M.
;
Moreno, G.
;
Nakashima, C.
;
Papizadeh, M.
;
Fazeli, S. A. Shahzadeh
;
Amoozegar, M. A.
;
Romberg, M. K.
;
Shivas, R. G.
;
Stalpers, J. A.
;
Stielow, B.
;
Stukely, M. J. C.
;
Swart, W. J.
;
Tan, Y. P.
;
van der Bank, M.
;
Wood, A. R.
;
Zhang, Y.
;
Groenewald, J. Z.
Adobe PDF(9466Kb)
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Submit date:2015/06/17
Its Dna Barcodes
Lsu
Novel Fungal Species
Systematics
Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants
期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 卷号: 108, 期号: 49, 页码: 19641-19646
Li, De-Zhu
;
Gao, Lian-Ming
;
Li, Hong-Tao
;
Wang, Hong
;
Ge, Xue-Jun
;
Liu, Jian-Quan
;
Chen, Zhi-Duan
;
Zhou, Shi-Liang
;
Chen, Shi-Lin
;
Yang, Jun-Bo
;
Fu, Cheng-Xin
;
Zeng, Chun-Xia
;
Yan, Hai-Fei
;
Zhu, Ying-Jie
;
Sun, Yong-Shuai
;
Chen, Si-Yun
;
Zhao, Lei
;
Wang, Kun
;
Yang, Tuo
;
Duan, Guang-Wen
Adobe PDF(601Kb)
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Submit date:2012/03/16
Land Plants
Species Identification
Nuclear Ribosomal (Nr) Dna
Dna Barcodes
Land Plants
Species Identification
Flowering Plants
Conservation
Speciation
Its2
Evolutionary
Phylogeny
Accuracy