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Epigenetic regulation of seed-specific gene expression by DNA methylation valleys in castor bean 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1, 页码: 57
作者:  Han, Bing;  Wu, Di;  Zhang, Yanyu;  Li, De-Zhu;  Xu, Wei;  Liu, Aizhong
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Seed-specific genes  DNA methylation valleys  Histone modifications  Enhancer  Castor bean  RICINUS-COMMUNIS L.  CENTRAL CELL  ARABIDOPSIS  EMBRYOGENESIS  TRANSCRIPTION  ENDOSPERM  IDENTIFICATION  ACCUMULATION  PLANTS  OIL  
Mining of the CULLIN E3 ubiquitin ligase genes in the whole genome of Salvia miltiorrhiza 期刊论文
CURRENT RESEARCH IN FOOD SCIENCE, 2022, 卷号: 5, 页码: 1760-1768
作者:  Gao, Xiankui;  Li, Xiujuan;  Chen, Chengan;  Wang, Can;  Fu, Yuqi;  Zheng, ZiZhen;  Shi, Min;  Hao, Xiaolong;  Zhao, Limei;  Qiu, Minghua;  Kai, Guoyin;  Zhou, Wei
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Salvia miltiorrhiza  Gene family  Expression pattern  Phenolic acid  Tanshinone CULLIN E3 ubiquitin ligase  PROTEASOME SYSTEM  ARABIDOPSIS  BIOSYNTHESIS  DEGRADATION  SUBSTRATE  SEQUENCE  ADAPTERS  
Cold Tolerance of ScCBL6 Is Associated with Tonoplast Transporters and Photosynthesis in Arabidopsis 期刊论文
CURRENT ISSUES IN MOLECULAR BIOLOGY, 2022, 卷号: 44, 期号: 11, 页码: 5579-5592
作者:  Zhou, Yanli;  Zhang, Jingling;  Zhao, Changhong;  Long, Guangqiang;  Zhou, Chengli;  Sun, Xudong;  Yang, Yunqiang;  Zhang, Chengjun;  Yang, Yongping
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calcineurin B-like protein  cold tolerance  Stipa capillacea  transcriptome  tonoplast  CALCIUM SENSOR  GENE-EXPRESSION  MONOSACCHARIDE TRANSPORTER  STRESS TOLERANCE  ABIOTIC STRESS  DROUGHT  ACCLIMATION  PROTEINS  PHOSPHORYLATION  OVEREXPRESSION  
Selection and Validation of Reference Genes for Quantitative Real-Time PCR Analysis of Development and Tissue-Dependent Flower Color Formation in Cymbidium lowianum 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 2, 页码: 738
作者:  Dong, Xiu-Mei;  Zhang, Wei;  Zhang, Shi-Bao
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Cymbidium lowianum  flower organ development  reference gene selection and validation  qRT-PCR  transcriptome data  geNorm and Normfinder software  POLYMERASE-CHAIN-REACTION  EXPRESSION  NORMALIZATION  QUANTIFICATION  
Phylogenomic and comparative analyses of Coffeeae alliance (Rubiaceae): deep insights into phylogenetic relationships and plastome evolution 期刊论文
BMC PLANT BIOLOGY, 2022, 卷号: 22, 期号: 1, 页码: 88
作者:  Amenu, Sara Getachew;  Wei, Neng;  Wu, Lei;  Oyebanji, Oyetola;  Hu, Guangwan;  Zhou, Yadong;  Wang, Qingfeng
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Coffeeae alliance  Phylogenomic  Plastome  Plastome structural variations (PSVs)  Rubiaceae  COMPLETE CHLOROPLAST GENOME  CODON USAGE BIAS  INVERTED REPEAT  SEQUENCE  ALIGNMENT  GENE  SUBFAMILIES  CONTRACTION  ANGIOSPERMS  EXPANSION  
Cold Response Transcriptome Analysis of the Alternative Splicing Events Induced by the Cold Stress in D. catenatum 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 2, 页码: 981
作者:  Zheng, Yan;  Luo, Landi;  Chen, Qian;  Yang, Danni;  Gong, Yuqiang;  Yang, Ya;  Qin, Xiangshi;  Wang, Yuhua;  Kong, Xiangxiang;  Yang, Yongping
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Dendrobium catenatum Lindl  alternative splicing  cold stress  DcCBP20  CAP-BINDING COMPLEX  FREEZING TOLERANCE  LOW-TEMPERATURE  ARABIDOPSIS  EXPRESSION  PROTEINS  GENES  ACCLIMATION  LANDSCAPE  REVEALS  
Genome-Wide Survey Indicates Diverse Physiological Roles of Dendrobium officinale Calcium-Dependent Protein Kinase Genes 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 3, 页码: 1298
作者:  Yang, Xingyu;  Chen, Zhiyu;  Yin, Xin;  Wang, Yuhua;  Yang, Yunqiang;  Yang, Yongping
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Dendrobium officinale  CDPK gene family  expression pattern  functional divergence  CA2+ SIGNALS  ARABIDOPSIS  RICE  CDPK  IDENTIFICATION  FAMILIES  ADAPTATION  ACTIVATION  EXPRESSION  MECHANISM  
Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
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DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
Genome-Wide Analysis of LBD Transcription Factor Genes in Dendrobium catenatum 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 4, 页码: 2089
作者:  Jia, Ru;  Li, Cheng;  Wang, Yuhua;  Qin, Xiangshi;  Meng, Lihua;  Sun, Xudong
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Dendrobium catenatum  LBD transcription factor family  phylogenetic analysis  expression profiles  phytohormone response  LATERAL ROOT-FORMATION  LOB DOMAIN  FAMILY  IDENTIFICATION  EXPRESSION  PROTEINS  MEMBERS  AUXIN  
Plastome characteristics and species identification of Chinese medicinal wintergreens (Gaultheria, Ericaceae) 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 6, 页码: 519-529
作者:  Xu, Yan-Ling;  Shen, Hao-Hua;  Du, Xin-Yu;  Lu, Lu
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DNA barcodes  Gene duplication  Plastome  Repeat sequences  Structural variation  CHLOROPLAST GENOME  PHYLOGENETIC ANALYSIS  INVERTED REPEAT  EVOLUTION  SEQUENCE  DNA  SOFTWARE  INSIGHTS  REARRANGEMENTS  ORGANIZATION